DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kis and Smarcad1

DIOPT Version :10

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:NP_031984.1 Gene:Smarcad1 / 13990 MGIID:95453 Length:1021 Species:Mus musculus


Alignment Length:1137 Identity:310/1137 - (27%)
Similarity:484/1137 - (42%) Gaps:277/1137 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1538 RFSDDENSLLVASPVKKDKKPSANASNSNAGSDVEKTEPQSGAEGDAAQEVGEEKSNLPLDESSQ 1602
            ||..::.|.:..:|     :.:...|.:...|.:..:..:..|||:.:      ::|.|..:.::
Mouse     8 RFRFEKRSKIEEAP-----EAAPQPSQARPSSPISLSAEEENAEGEGS------RANTPDSDVTE 61

  Fly  1603 LEASSSTSAVAEKERQISTDAANAAMSSKPN------YVYINTGDED-----SMVVQLVLAMRMG 1656
            ....||.....:.||:       |::|...|      |:.:::..||     |..||   ..:..
Mouse    62 KTEDSSVPEPPDNERK-------ASLSCFQNQRAIQEYIDLSSDTEDVSPNCSSTVQ---EKKFS 116

  Fly  1657 KRELILDKPKEKAPEPKQDEEKSELDEAT--TDKPE----------GDEKFKTEGESKKDLTDSE 1709
            |..:|:      ..||.:|||..:|...|  .|..|          .|.|.:|..|.....:||:
Mouse   117 KDTVII------VSEPSEDEESHDLPSVTRRNDSSELEDLSELEDLKDAKLQTLKELFPQRSDSD 175

  Fly  1710 ETKLESSAMEVDS-----------------KEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKES 1757
            ..||..|...:|.                 |.:.    |..|:||:.:      ||:..|..:..
Mouse   176 LLKLIESTSTMDGAIAAALLMFGDAGGGPRKRKL----SSSSEEDDVN------DDQSVKQPRGD 230

  Fly  1758 KPEEQSETVKTEENSKAIEEDKSSTVL-------------TADHAKEPE----TVLEKMEVDEKA 1805
            :.||.:|:.:...|    .|.:.|.||             ..:..||.|    ..||.::|..:.
Mouse   231 RGEESNESAEASSN----WEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAED 291

  Fly  1806 NDDQSA-VSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKTEADME 1869
            .|.|.| .|:.....|.:.:.:..:.||..|.|:.:.::.:....|:.:::|  .|.:|...|.|
Mouse   292 QDVQCASQSEVTNGKEVARNQNYSKNATKIKMKQKISVKPQNGFNKKRKKNV--FNPKKAVEDSE 354

  Fly  1870 -NKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRF---------------QQ 1918
             :........::|        .|..|| ...|:..||      ||..|               .|
Mouse   355 YDSGSDAGSSLDE--------DYSSCE-EVMEDGYKG------KILHFLQVSSIAELTLIPKCSQ 404

  Fly  1919 KQSQQLNIFENIEDEPFNQ---DFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELE 1980
            |::|::.     |..|||.   .||::.::..:|                       ||..|..:
Mouse   405 KKAQKIT-----ELRPFNNWEALFTKMSKINGLS-----------------------EDLIWNCK 441

  Fly  1981 ----------------EDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSL 2029
                            ||:.|...:|.....  .....|   .|..|.|..:         ..||
Mouse   442 TVIQERDVVIRLMNKCEDISNKLTKQVTMLT--GNGGGW---NREQPSLLNQ---------SLSL 492

  Fly  2030 RPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQR 2094
            :|||..|||||.....:..|.|||||||||||||::.|:..:::.|.:||.|::.|.|||.||.|
Mouse   493 KPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLR 557

  Fly  2095 EFEGW-TDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAF 2158
            |...| ..:||:.|:||...::.|: :..:.|.|.         :||::||:...::...|...|
Mouse   558 EVNLWCPSLNVLCYYGSQEERKQIR-FNIHNKYED---------YNVIVTTYNCAISSSDDRSLF 612

  Fly  2159 NWRL----CVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSS 2219
            . ||    .:.||.|.|||......:.|..:|..:|:||:|||:|||:.||.|||||:.|..|||
Mouse   613 R-RLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSS 676

  Fly  2220 QEEFMSEFGSLRT----------EEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNI 2274
            ....:....|.:|          :|.:...:.::||.:|||:|::|.|.|.||::.|....::..
Mouse   677 STSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDRIELCAMSEK 741

  Fly  2275 QKKYYRGI---LEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYL------------------ 2318
            |::.|.|:   |:::.:.|:|.|      .:.|.||:|||...||.|                  
Mouse   742 QEQLYSGLFNRLKKSINNLEKNT------EMCNVMMQLRKMANHPLLHRQYYTPEKLKEMSQLML 800

  Fly  2319 -----------LNGAEEQIQYDF-------KSQHGEDPESYY--KNLILSAGKMVLIDKLLPKLK 2363
                       |...:.::..||       :.||   ..||.  .:|||.:||...:..:|.:||
Mouse   801 KEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQH---INSYQLDMDLILDSGKFRALGCILSELK 862

  Fly  2364 ANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKA 2428
            ..|.||::|||....|||||..|.:.::.:.|:||:.:.:.|...||.:: ...|.|||||.|||
Mouse   863 QKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTKA 926

  Fly  2429 GGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLG 2493
            ||||||||:|:.||::|.|.||.||.||:.||||:||.|.|.:.:|:.:.|.|..|......||.
Mouse   927 GGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLK 991

  Fly  2494 LDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLK 2525
            |:    |.|.|....|..:   ...:|..|||
Mouse   992 LE----QDMTTVDEADEGS---MPADIATLLK 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 Atrophin-1 221..>533 CDD:460830
Med15 <1056..>1265 CDD:312941
PRK12678 1319..>1500 CDD:237171
PTZ00121 <1419..1923 CDD:173412 94/458 (21%)
CD1_tandem_CHD5-9_like 1851..1918 CDD:349315 15/82 (18%)
CD2_tandem_CHD5-9_like 1937..1995 CDD:349310 10/76 (13%)
PLN03142 2029..>2606 CDD:215601 196/553 (35%)
PTZ00341 <3662..3887 CDD:173534
BRK 4568..4611 CDD:462196
Smarcad1NP_031984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 16/91 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..151 9/26 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..246 12/58 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..366 6/38 (16%)
HepA <480..992 CDD:440319 191/541 (35%)
DEGH box 623..626 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000255 716..733 8/16 (50%)
DEAD box 1000..1003 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.