DRSC/TRiP Functional Genomics Resources

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Protein Alignment kis and chd3

DIOPT Version :9

Sequence 1:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster
Sequence 2:XP_002940874.3 Gene:chd3 / 100216299 XenbaseID:XB-GENE-1008908 Length:2036 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kisNP_001137761.1 BASP1 1554..1786 CDD:283191
HepA 1676..2527 CDD:223627
SDA1 <1693..>1854 CDD:283052
CHROMO <1879..1919 CDD:237991
Chromo 1941..1996 CDD:278797
DEXDc 2048..2197 CDD:238005
Helicase_C 2350..2464 CDD:278689
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
chd3XP_002940874.3 CHDNT 197..250 CDD:400425
PHD1_CHD_II 403..445 CDD:277006
PHD2_CHD_II 479..521 CDD:277007
CD1_tandem_CHD3-4_like 526..604 CDD:349314
CD2_tandem_CHD3-4_like 647..701 CDD:349309
PLN03142 738..>1293 CDD:215601
DEXHc_CHD3 755..986 CDD:350813
DUF1087 1327..1377 CDD:399459
DUF1086 1398..1537 CDD:368921
PspC_subgroup_2 <1535..1750 CDD:411408
CHDCT2 1780..1906 CDD:400426
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D54215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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