DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Tbc1d15-17 and AT5G54780

DIOPT Version :9

Sequence 1:	NP_001259806.1	Gene:	Tbc1d15-17 / 33184	FlyBaseID:	FBgn0031233	Length:	715	Species:	Drosophila melanogaster
Sequence 2:	NP_200289.2	Gene:	AT5G54780 / 835568	AraportID:	AT5G54780	Length:	432	Species:	Arabidopsis thaliana

Alignment Length:	426	Identity:	102/426 - (23%)
Similarity:	175/426 - (41%)	Gaps:	116/426 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   305 GGSAEKSPADS----ELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIK 365
            |.:||  ||||    ..|..:..:.|.        :::.|..|:..:|....|.:|.: |..:..
plant     3 GAAAE--PADSYYLIRPECTDVPNTKF--------KIKPGKTLSVRKWQAAFTTEGFL-DIGKTL 56

  Fly   366 ELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAM----------- 419
            ..|.|||:..|:|.|||:|||..|....|..||.:.|:::.::|.:.|.:...|
plant    57 SRIQRGGIHPSIRGEVWEFLLGCYDPKSTFEEREQIRQRRRLQYASWKEECKQMFPVIGSGGFIT 121

  Fly   420 --------------TTTQEANF-------------CGYRERKC--------QIEKDVKRTDRSLQ 449
                          ...||.|.             .|..::|.        ||..||.||||:|.
plant   122 APVITNKGEPIYDPIVLQETNLGANGSDFFKDLASRGPLDQKVIQWLLTLHQIGLDVNRTDRTLV 186

  Fly   450 FFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNF 514
            |:  |...||:.|..||..|...:.|:||.||||||.:|::.:..:|.|.||||...|..:..||
plant   187 FY--EKKENLSKLWDILALYAWIDNDVGYCQGMSDLCSPMIMLLEDEADAFWCFERLMRRLRGNF 249

  Fly   515 -DIDQA-GMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWEC 577
             |..:: |::.|...:..:.:..:..|.:::......:..|..|.::|.::||.:..|.|.|||.
plant   250 RDTGRSVGVEAQLTHLASITQIIDPKLHHHLEKLGGGDYLFAIRMIMVQFRREFSFCDSLYLWEM 314

  Fly   578 LWT-------------------RL-------------------------------PCPNFHLLFS 592
            :|.                   |:                               |.|....|.:
plant   315 MWALEYDPEMYSLYEEPQFEGERIEGSSKGKPKSINQCGKYERENMKNGGKSAEGPLPISVFLVA 379

  Fly   593 VAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQK 628
            ..:.|:.::::.::: ...:::|.:|:::||:|.:|
plant   380 SVLKDKSSKLMTEAR-GLDDVVKILNDITGNLDAKK 414

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tbc1d15-17	NP_001259806.1	DUF3548	37..>191	CDD:192931
Tbc1d15-17	NP_001259806.1	TBC	369..598	CDD:214540	79/326 (24%)
AT5G54780	NP_200289.2	TBC	148..317	CDD:214540	52/170 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5210
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1495285at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820