DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d15-17 and AT5G24390

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_197827.1 Gene:AT5G24390 / 832510 AraportID:AT5G24390 Length:528 Species:Arabidopsis thaliana


Alignment Length:521 Identity:110/521 - (21%)
Similarity:188/521 - (36%) Gaps:188/521 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 LSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQT 353
            ::.|:.::|||:....   ..|||.                   .|::.::  |||..:|....|
plant    33 VTSSSPASCSSSSDPH---RLKSPW-------------------SRRKGKK--PLTLRRWRRCFT 73

  Fly   354 PDGRISDSA--RIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQW 416
            |:|||.:..  .:|::..| |:..|:|.|||.|||....::.:..||...|..:...|..::.|.
plant    74 PEGRIRNGGVDLLKKVRTR-GIDPSIRSEVWPFLLGVCDFNSSEEERGATRTWRRKVYERLRRQC 137

  Fly   417 LAM--------------TTTQE-----------------ANFCGYRER----------------- 433
            ..:              .|||:                 .:.|...|.                 
plant   138 KRLQKQNSGTFKLNKINKTTQDDEHDSWSLAQDSESSCSDDACSVHESLISDKDNTEDIGYMSDV 202

  Fly   434 KCQIEKD-------------------------------------------VKRTDRSL------- 448
            .|.:::|                                           :.||....       
plant   203 SCTLDRDYNGSRHLNSESSDSDSSDENDYVQVAPSCEGKDENSTSPSSIYISRTKEDFVTWQRII 267

  Fly   449 -----------------QFFAGEDNP---------------------NLTLLQGILMTYVMYNFD 475
                             |....|:..                     :...|..:|..|.:::.:
plant   268 RLDALRADTEWTPYSQSQALVSENRARRAAEAVGLKDYSYLEPSKIFHAARLVAVLEAYALHDPE 332

  Fly   476 LGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLF 540
            :||.|||||||:|||.:..::.:.||||||||:....||.:|:.|:..|...:.::|:..::.|:
plant   333 IGYCQGMSDLLSPILSVIPDDYEAFWCFVGFMKKARQNFRVDEVGITRQLNIVSKIIKSKDSQLY 397

  Fly   541 NYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWT--------------------RLPCP 585
            .::....:::.:|.:|.:||.::|||..|..|.|||.:|.                    |.|..
plant   398 KHLEKVKAEDCFFVYRMVLVMFRRELTLEQTLHLWEVIWADQAAIRAGMGKSSWSRRIKQRAPPT 462

  Fly   586 NFHLLFSVA--ILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQL--KGSETL 646
            ...||:.||  :| |..:|||:......|||:..:.:.|.:||.|.|..|..:.:.|  |...::
plant   463 EDLLLYVVAASVL-QRRKVIIEKYSSMEEILRECHNMVGKLDVWKLLDDAHDLIVTLHAKIEHSI 526

  Fly   647 P 647
            |
plant   527 P 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 76/386 (20%)
AT5G24390NP_197827.1 TBC <322..482 CDD:214540 51/160 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.