DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and AT4G28550

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_194584.3 Gene:AT4G28550 / 828973 AraportID:AT4G28550 Length:424 Species:Arabidopsis thaliana


Alignment Length:394 Identity:99/394 - (25%)
Similarity:160/394 - (40%) Gaps:84/394 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 EKIVNNLP-DRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWKFLLNY 388
            |:.|.::| .|.:...|..|:..:|....|.||.: |..|:...|.|||:..|::.|||:|||..
plant    23 EECVADVPRTRFKSRAGKTLSARKWHAAFTGDGHL-DMERVLRRIQRGGIHPSIKGEVWEFLLGA 86

  Fly   389 YLWSDTHVERIERRKQKSIEYYNMK-----------------------------------AQWLA 418
            |....|..||.:.|..:..:||..|                                   .:|:.
plant    87 YDPDSTFEERNKLRNHRREQYYAWKEECKNMVPLVGSGKFVTMAVVAEDGQPLEESSVDNQEWVV 151

  Fly   419 MTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMS 483
            .|...:.....:.....||..||.||||.|.|:..|.|.  ..|..||..|...|.|:||||||:
plant   152 KTAITDKRVLQWMLVLSQIGLDVVRTDRYLCFYESESNQ--ARLWDILSIYTWLNPDIGYVQGMN 214

  Fly   484 DLLAPILEIQVNEVDTFWCFVGFMELVFTNF--DIDQAGMKTQFAQIRRLIEFANAPLFNYMRSH 546
            |:.:|::.:..:|.|.||||...|..:..||  .....|::||...:.::|:..:..|..::...
plant   215 DICSPMIILLEDEADAFWCFERAMRRLRENFRTTATSMGVQTQLGMLSQVIKTVDPRLHQHLEDL 279

  Fly   547 DSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPN------------------------- 586
            |.....|..|.|:|.::||.:..|.|.|||.:|.....||                         
plant   280 DGGEYLFAIRMLMVLFRREFSFLDALYLWELMWAMEYNPNKFASYEEPQNMNNSSGQDPRLLKQY 344

  Fly   587 --FH---------------LLFSVA-ILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVA 633
              |.               .:|.|| :|:.:.:.::.......::::.:..::||:|.:|..:.|
plant   345 GKFERKYIKSGQNEQHNTLAVFVVASVLETKNKRLLKEAKGLDDVVQILGGIAGNLDARKACKEA 409

  Fly   634 EGIY 637
            ..|:
plant   410 LKIH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 80/308 (26%)
AT4G28550NP_194584.3 RabGAP-TBC 163..313 CDD:366170 52/151 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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