DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and AT2G43490

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001118514.1 Gene:AT2G43490 / 818950 AraportID:AT2G43490 Length:745 Species:Arabidopsis thaliana


Alignment Length:549 Identity:114/549 - (20%)
Similarity:202/549 - (36%) Gaps:161/549 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 YAILTTENQK------LKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQ----- 262
            ||:.:|...:      .:|.:.:|    :|..|....|.....||.::|:....::..::     
plant    96 YALSSTSEYRNQLRVARRKRYNDL----LKQCQTMHSSVGTGSLAYVVGSKVMDMRKSYRDEAVK 156

  Fly   263 --RSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDE 325
              .:.::|....|..:...:.:|:.   ...|.|...:|:...||.|:|.....|..|:    .|
plant   157 VATTDENREDAFIDNNDNANTENHH---SDWSNNGTDTSHLHRRGSSSESVDLVSGRES----PE 214

  Fly   326 KIVNNL--------------PDRQRVERGHPLTE------TQWLEFQTPDGRISDSARIKELIFR 370
            .:|.|.              ||........|:|:      ...:|..|||    :.|.:|     
plant   215 SVVYNTSSFVSASSPYGYASPDGYFDFPSLPVTDLFGRNSLDKIEVSTPD----EDASLK----- 270

  Fly   371 GGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFC-GYR--- 431
                ..||.|. :.:.|:.:..:..:.|.:||....|:..:..:...:..|.:.|... |.|   
plant   271 ----SELRSED-EGMHNFRIDKNADLIREQRRSTPEIKVMHSDSVGPSSYTGRNAEIVDGLRISD 330

  Fly   432 -------------------ERKCQ-------IEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYV 470
                               :|..:       |..||.|||..|:|:  ||..||..:..||..|.
plant   331 VPEMASVKDTPSRVGNVTEDRVSEWLWTLHRIVVDVVRTDSHLEFY--EDPGNLGRMSDILAVYA 393

  Fly   471 MYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDID-QAGMKTQFAQIRRLIEF 534
            ..:...||.||||||::|.:.:..:..|.||||...:.....||.:: ..|:..|...:..:::.
plant   394 WVDPATGYCQGMSDLVSPFVVLFEDNADAFWCFEMLIRRTRANFQMEGPTGVMDQLQSLWHILQI 458

  Fly   535 ANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQE 599
            .:..:|:::....:::::|.||.|||.::|||:..:.|::||.:|.                   
plant   459 TDKDIFSHLSRIGAESLHFAFRMLLVLFRRELSFNEALRMWEMMWA------------------- 504

  Fly   600 TRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSIIGEPL---LPA 661
                  :.|:                        |.:      :|||.||..    |||   ||.
plant   505 ------ADYD------------------------ESV------TETLENDCL----EPLVIQLPR 529

  Fly   662 AAGEEIDGGMVDE--------EPTYSDDG 682
            .:..|:...|:::        ||..|..|
plant   530 KSEPEVSEEMIEDGIGNSTKREPMISKSG 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 60/259 (23%)
AT2G43490NP_001118514.1 TBC <358..508 CDD:214540 47/176 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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