DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d15-17 and si:dkey-238d18.4

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_003200122.1 Gene:si:dkey-238d18.4 / 796120 ZFINID:ZDB-GENE-131121-307 Length:472 Species:Danio rerio


Alignment Length:492 Identity:118/492 - (23%)
Similarity:186/492 - (37%) Gaps:161/492 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 ISGDRQTSPDNYQIIGLSGSTNS--------ACS----SNGQSRGGSAEKSPADSELETLNAQDE 325
            :.|:.:..||         |||.        .||    |||..|..:...|||.:....      
Zfish    10 VEGNCKKLPD---------STNGPVGKFKGMKCSLSVGSNGICRSVAPVISPASTCARI------ 59

  Fly   326 KIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFR-GGVVQSLRPEVWKFLLNYY 389
                .||.....|                 ||: |.:|::..||: |||....|.:||:||.:.|
Zfish    60 ----TLPGVMDAE-----------------GRV-DESRLRTHIFKNGGVSPDERGQVWRFLFSMY 102

  Fly   390 LWSDTHVERIERRKQKSIEYYNMKAQW-------------------------------------- 416
            ..|.|.:||....:|.::.|..||.:|                                      
Zfish   103 PCSSTALERPLLLEQMAVRYQVMKRKWQQLLPGAVRLRLNGTDAELLTAVKFFDQRQDRELNKQQ 167

  Fly   417 LAMTTTQEANFCGYRERKCQ-------------------IEKDVKRTDRSLQFFAGEDNPNLTLL 462
            :....|||.  ..:.:.:.|                   |:|||.||||.|.::..|...||.:|
Zfish   168 IQSDETQER--LSFLQLQAQVLFERVTFDLEELQEAIRIIDKDVPRTDRDLPYYRNEGLGNLLVL 230

  Fly   463 QGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQ 527
            :.||:||..::.::.|.|||:||.:..||:..:||||:|.|..:||....:|..|  |:..:...
Zfish   231 RDILITYAAFHPEVSYAQGMNDLCSRFLEVLDSEVDTYWSFSCYMEKFSKDFRAD--GLYRKMEL 293

  Fly   528 IRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECL-------------- 578
            ...|::..:..|.:::.:.:.:.:.||.||||:.::||....|.|:|:|.|              
Zfish   294 EAALLKELDPQLHSHLVTDNMERLTFCHRWLLLGFQREFEHSDALRLFEILSCDHLELISQQVDC 358

  Fly   579 ---WTRL---------PCPNFHL--------LFSVAILDQETRVIIDSQYEFTEILKHVNELSGN 623
               ..||         |..:.|.        ||..|.:..|.|..:.|.....::::..:.|.|.
Zfish   359 VRYQERLARKHSLEEEPVADLHAVNTDFTFELFMCATILLENREALLSCKNEVQLIQFTSSLQGK 423

  Fly   624 IDVQKTLQVAE----------------GIYLQLKGSE 644
            :|:..||:.||                |:|...|..|
Zfish   424 LDLNATLKKAEELMRNYCKSSSWDYLSGLYRMRKSKE 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 81/320 (25%)
si:dkey-238d18.4XP_003200122.1 TBC <204..352 CDD:214540 51/149 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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