DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and Tbc1d8

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_006244913.1 Gene:Tbc1d8 / 680133 RGDID:1595491 Length:1150 Species:Rattus norvegicus


Alignment Length:758 Identity:149/758 - (19%)
Similarity:249/758 - (32%) Gaps:257/758 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DVQNLPQQGTGNILFTHDGVLLKKASAEHIADLNTSGSLSLV-EYSRSIAEMPRRRLLLEWQPND 92
            |:|.|  :.|.|:..| |.:.:...:.|.  |.:|..:|..| :....:|::..||||    .|:
  Rat   219 DIQKL--ERTSNVFLT-DTIRITTQNKER--DFSTFLNLDEVFKIMEQLADVTLRRLL----DNE 274

  Fly    93 SIMIADDSQDQGDWALVDRISGRTRTTSE-CRAFNTRPIE-------------PSGGATTRSRVM 143
            ...:..|.|:...   :.:.....|..:| .|||...|.:             |.....|..|:.
  Rat   275 VFDLDPDLQEPSQ---ITKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTAGRIF 336

  Fly   144 RAQ------------------LEDLSSVEVRHRGQTIRFMRKGANGVHSEFFFQHGNADLFVRSM 190
            .:.                  |.::.|:|                                  .|
  Rat   337 SSDSYICFASREDGCCHVVLPLREVVSIE----------------------------------KM 367

  Fly   191 RDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGIL----- 250
            .|..|:.|           .|:.:...|:...|.||.         .||    |.:.|:|     
  Rat   368 EDTSLLPN-----------PIIVSIRSKMAFQFIELK---------DRE----NLVEGLLLRLKQ 408

  Fly   251 --GNIPDYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSACS---------SNGQSR 304
              .|.|.:    ::.||        |.|...||..|        :.|.|:         |:..|.
  Rat   409 VHANHPVH----YETSP--------SDDDMASPVFY--------STSICTDKFGDLEMVSSQSSE 453

  Fly   305 GGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGR---ISDSARIKE 366
            ....||||.... |.|.|..::..:..|| .|:.| ..:..:.|.:.....||   :..:.:|::
  Rat   454 EREKEKSPLPHP-EPLTAVFQQSGSQSPD-SRLSR-EQIKISLWNDHFAEYGRTVCMFRTEKIRK 515

  Fly   367 LIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYY-NMKAQWLAMTTTQEANFCGY 430
            |:.. |:.:|||..:|      .|:||...:.....     .|| |:..|.|.            
  Rat   516 LVAM-GIPESLRGRLW------LLFSDAVTDLASHP-----GYYGNLVEQSLG------------ 556

  Fly   431 RERKCQIEKDVKR-TDRSL-QFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQ 493
              |.|.:.::::| ..||| :..|.::...:..|:.:|..|...|..:||.|.| ::|..:|.:.
  Rat   557 --RCCLVTEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSM-NILTSVLLLY 618

  Fly   494 VNEVDTFWCFVGFMELVFTNF--------DIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDN 550
            ..|.:.||..|...|.:..::        .:||:..:....:  .|.|.|         .|.||.
  Rat   619 AKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKE--HLPELA---------EHMSDL 672

  Fly   551 MYFC---FRWLLVWYKRELNSEDVLKLWECLW--------------------------------- 579
            ....   ..|.|..:...:..|..:.:.:|.:                                 
  Rat   673 SALASISLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVLEANAEELCSSKDDGQALM 737

  Fly   580 --TRL------------PCPNFHLLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKT- 629
              :|.            |..:.|..||.   |||...:.|    ..::::...|..||..|::. 
  Rat   738 ILSRFLDHIKNEDSPGPPIGSHHAFFSD---DQEPCPVTD----IADLIRDSYEKFGNQSVEQIE 795

  Fly   630 -LQVAEGIYLQLKGSE--TLPNDIRSIIGE-PLLPAAAGEEID 668
             |:....|.: |:|.|  |..|.:|.:|.| .:||....|..|
  Rat   796 HLRCKHRIRV-LQGHEDTTKQNVLRVVIPEVSILPEDLEELYD 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 29/186 (16%)
TBC 369..598 CDD:214540 52/289 (18%)
Tbc1d8XP_006244913.1 PH-GRAM1_TBC1D8 171..269 CDD:270156 13/54 (24%)
PH-GRAM2_TBC1D8 311..406 CDD:270160 20/152 (13%)
TBC 520..726 CDD:214540 47/242 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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