DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc1d25

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001121708.1 Gene:tbc1d25 / 556338 ZFINID:ZDB-GENE-041111-25 Length:863 Species:Danio rerio


Alignment Length:536 Identity:141/536 - (26%)
Similarity:238/536 - (44%) Gaps:118/536 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 QHLIENA--------------ETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESWLP 243
            ||::..|              ...|:|.|||..|.::        .:||...:.|::        
Zfish    41 QHILIRAFELNGKRNFGISYLSRDRAGVEVYVSLLSD--------WDLDAAFVSAAK-------- 89

  Fly   244 NKLAGILGNIPDYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIG---LSGSTNSACSSNGQSRG 305
                       .|:|......|.....||...|..:..|   :||   |.|...|..|:      
Zfish    90 -----------PYLQLKMDIKPSEDSPVLEDWDIISPKD---VIGSDQLQGEKRSLASA------ 134

  Fly   306 GSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGH-------PLTETQWLEFQTPDGRISDSAR 363
                   |....::|.:|..:.::.:........|.       ||::.::..:....|::|....
Zfish   135 -------ALPFTQSLLSQVGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHNYLNSQGQLSRPEE 192

  Fly   364 IKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFC 428
            ::..|:.|||..|||..||::|||.|....|..||::..|:|:.||..:|::|.|..:::|..|.
Zfish   193 LRLRIYHGGVESSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYDQLKSEWTARVSSEELEFI 257

  Fly   429 GYRERKCQIEKDVKRTDRSLQFFAG-EDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEI 492
                 :..:.|||.||||:..::|| ||:|:||.|..:|.|:.:.:..:.|.|||||:.:|||.:
Zfish   258 -----RGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHPQVSYCQGMSDIASPILAV 317

  Fly   493 QVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRW 557
            ..||...|.||.|.|:.:..||..|...|..:|..::.|:::::...::|:.|..:|:::||:||
Zfish   318 MDNEAHAFICFCGIMKRLEGNFRPDGQLMSIKFQHLKLLLQYSDPEFYSYLVSKGADDLFFCYRW 382

  Fly   558 LLVWYKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQETRV-IIDSQYEFTEILKHVNELS 621
            ||:..|||...:|.|::.|..|:.|| |:          ..||.| ::...:|..:     ::.|
Zfish   383 LLLELKREFAFDDALRMLEVTWSSLP-PD----------PPETEVELLGPAFEADQ-----SDGS 431

  Fly   622 GNIDVQKTLQVAEGIYLQLKGSETLPNDIRSIIGEPLLPAAAGEEIDG--GMVDEE---PTYSDD 681
            .|:|:::         ::.|.:|      |......|.|:.  ||.||  .:|.||   |....:
Zfish   432 HNVDMEE---------MEEKQTE------RQRRRHMLRPSR--EEADGERNLVMEEERGPRKEGE 479

  Fly   682 GFDELVKELTPEEKVR 697
            |      |...|..||
Zfish   480 G------EYDVESMVR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 82/229 (36%)
tbc1d25NP_001121708.1 TBC 198..420 CDD:214540 85/237 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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