DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc1d17

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_005164004.1 Gene:tbc1d17 / 554092 ZFINID:ZDB-GENE-050522-79 Length:639 Species:Danio rerio


Alignment Length:669 Identity:225/669 - (33%)
Similarity:328/669 - (49%) Gaps:122/669 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ILFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ---- 101
            ::|..:||.|...:.....|....|.:.:||.....|        |||.|     :.||.:    
Zfish    10 LIFEKEGVYLHTNAKRSNQDTTIPGFIRIVERDGEPA--------LEWSP-----VEDDGRNAPA 61

  Fly   102 -----------------DQG---DWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQ 146
                             |.|   |||::.       |..:.|.....|:..:|..::.|    ..
Zfish    62 VFYTKKDGEGGEEETKFDPGYEPDWAVIS-------TVKQDRRQEQPPVRETGHWSSFS----LP 115

  Fly   147 LEDLSSVEVRHR---GQTIRFM-RKGANGVHSEFFFQHGNADLFVRSMRDQHLIENAETSRSGGE 207
            |.:|.|:. |.|   |:....: .:|.:.:....|.:.|..:| :::|  |..|..| .|...|.
Zfish   116 LSELYSLR-RARFSLGRNFLVLTTRGGDPLPPLHFHRGGTREL-LKAM--QRYIRLA-PSPMDGR 175

  Fly   208 VYAILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVL 272
            ::.....::..|.::|.||.:....::.|                :..::|.|:..:        
Zfish   176 LFLAYPHDSGALSQSFDELHLFDDTSADL----------------VSRFIQDPYATT-------- 216

  Fly   273 ISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADS------------ELETLNAQDE 325
                         ..|.|..||....:..........:||.|.            ||.|..|:  
Zfish   217 -------------FGGFSKVTNFFRGALRNPESPLNNRSPQDPHFPHSADEEPGFELITCGAE-- 266

  Fly   326 KIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWKFLLNYYL 390
                 |..|..|:||.||  ..|.:|..|:||::|..::|||:||||:|..||.|||||||.:|.
Zfish   267 -----LGPRPEVKRGKPL--DNWEQFLDPEGRVTDPQKVKELVFRGGIVPYLRKEVWKFLLGFYP 324

  Fly   391 WSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEAN---FCGYRERKCQIEKDVKRTDRSLQFFA 452
            |:.|..||.:....|:.||:.||.||.:::..||..   |.|||.   .||:||.||||...||:
Zfish   325 WNSTTKEREDILMVKTDEYFRMKVQWKSVSEEQEMRNSLFRGYRS---LIERDVNRTDRHNSFFS 386

  Fly   453 GEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDID 517
            |.:||.||||..:||||.||||||||||||||||:|:|.:..|||::|||..|||:||..||:..
Zfish   387 GNENPGLTLLHDVLMTYCMYNFDLGYVQGMSDLLSPLLFVTQNEVESFWCLTGFMDLVHQNFEES 451

  Fly   518 QAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRL 582
            |..||.|..|:..|:...:..|.:|:.|.||.::.|||||||:|:|||.:.||:|.|||.|||||
Zfish   452 QEAMKQQLLQLSLLLRALDPELCDYLDSQDSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRL 516

  Fly   583 PCPNFHLLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLP 647
            ||.|||||.:.:||:.:...:|.|.::|..||||:|||:..:|:|..|..||.|||||...:.|.
Zfish   517 PCENFHLLMACSILESQKEELIGSNHDFNSILKHINELTMKLDLQSVLCGAEAIYLQLTHCKELS 581

  Fly   648 NDIRSIIGEPLLPAAAGEE 666
            ..::.::| ..:|:.:.|:
Zfish   582 PKVQEVLG-LRIPSGSSEQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 35/177 (20%)
TBC 369..598 CDD:214540 126/231 (55%)
tbc1d17XP_005164004.1 DUF3548 5..211 CDD:192931 46/245 (19%)
TBC 303..538 CDD:214540 126/237 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 260 1.000 Domainoid score I1930
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 338 1.000 Inparanoid score I2348
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 1 1.000 - - FOG0002107
OrthoInspector 1 1.000 - - otm24835
orthoMCL 1 0.900 - - OOG6_101355
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2140
SonicParanoid 1 1.000 - - X1395
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

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