DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and CG42795

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster


Alignment Length:488 Identity:107/488 - (21%)
Similarity:171/488 - (35%) Gaps:143/488 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 DYVQPPFQRSPKSRPGVLISGDRQTSPDNYQI-----IGLSGSTNSACSS--------NGQSRGG 306
            |..||..:.|....|...|:..|.|||....:     |...||.|.:.||        ||...|.
  Fly   116 DDAQPKMRFSLSPPPQKAITSARLTSPTKNSLSSNNTITTPGSNNRSPSSTKTTMLTRNGGGHGT 180

  Fly   307 SAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFR- 370
            |...|.:........|.|::..::.              .|||             ...:|:.| 
  Fly   181 SPTASGSGHAPSATAAADDEATSDY--------------NQWL-------------HAMKLVARL 218

  Fly   371 -GGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFC-GYRER 433
             ||.....|.::|..|.:.||            |.|::::...:          |..|| .:||.
  Fly   219 PGGTPPEFRRKLWLSLADKYL------------KSKNVDWAQQR----------EKCFCEEWRED 261

  Fly   434 K----CQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQV 494
            .    .||.||:.||..:| ......:.|...|:.||:.|..||.::||.||.:.|.|.||::..
  Fly   262 DEELGIQIVKDLHRTGSNL-CTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMD 325

  Fly   495 NEVDTFW--------------CFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRS 545
            .|.:...              .|.|.|..:..:..:.:..|:|:..::.:.::....|:.|....
  Fly   326 KEEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEP 390

  Fly   546 HDSDNMYFCFRWLLVWYKRELNSEDVLKLWE---------------CLWTRLPCPNFHLLFSVAI 595
            ..::  .|..:|.|..:...|....||::|:               .||:.|             
  Fly   391 PLTN--VFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLL------------- 440

  Fly   596 LDQETRVI-IDSQYEF--------TEILK-HVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDI 650
               |.||| :.|..||        :|:|. |:.:.:|.|:....|...|              |:
  Fly   441 ---EERVISVRSADEFYGKMGSYSSELLNGHLVDSNGLIERVVKLGPIE--------------DL 488

  Fly   651 RSIIGEPLLPAAAGEEIDGGMV--DEEPTYSDD 681
            |.:..:.|...|......|..:  |||.|:||:
  Fly   489 RQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 55/264 (21%)
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:278964 41/193 (21%)
DUF4682 560..684 CDD:292361
DBP 1112..1415 CDD:289157
SWIRM-assoc_2 <2376..2482 CDD:293105
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456560
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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