DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and plx

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster


Alignment Length:668 Identity:127/668 - (19%)
Similarity:249/668 - (37%) Gaps:154/668 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 IADDSQDQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQ 160
            ::||.|:. .||   :..|..:|.|.....|          .....::||..|   |.:.||   
  Fly   652 LSDDEQEI-VWA---KFCGSEKTNSPVAEQN----------QFLMMLLRAHCE---SRQQRH--- 696

  Fly   161 TIRFMRKGANGVH------SEFFFQH-GNADLFVRSMRD-QHLIENAETSRSGGEVYAILTTENQ 217
                       ||      |||..|: |.:.:|:::.|. .:..:|....:...:..|:.:...:
  Fly   697 -----------VHDTAENRSEFLNQYLGGSTIFMKAKRSLTNSFDNLLKRKPSKDDIAVPSHNLR 750

  Fly   218 KLKKTFAE-----------------------------------LDIGQIKASQLPRE------SW 241
            .:::..||                                   :|| .||....|:|      ||
  Fly   751 DIREGSAEPLGTQSPPEGFRSRSNTVGASPSSKPTAEQLKSPMMDI-FIKVGNSPKEAETHQGSW 814

  Fly   242 ---------LPNKLAGILGNIP-DYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSA 296
                     .|:|  |:...:| :::.|  .|.|..|      |.|..:  ..:.:..:....:.
  Fly   815 RQAILNSVVTPSK--GLDSEVPTEFLSP--MRKPAKR------GKRDAA--ELRELWRTAIRQTI 867

  Fly   297 CSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLP-DRQRVERGHPLTETQWLEFQTPDGRISD 360
            ..:..::.....:....::||:.:....|:||   | |:|.:||...:.|..    .|..|...|
  Fly   868 MLNRMETENAMLQARQNENELKRIKLDYEEIV---PCDKQLIERWEQIIERN----STQIGNKKD 925

  Fly   361 SARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLA--MTTTQ 423
            ...:...| |.||.:|.|.:||.||...:..:...|:      .|....:|.....|.  :|..|
  Fly   926 PKVLGHAI-RTGVPRSKRGDVWTFLAEQHSMNTAPVD------TKRFPNFNTPYHMLLKHLTEHQ 983

  Fly   424 EANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAP 488
            .|.|.           |:.||..:.||:..........|..:|..|.:.:.:|||.||:. .:..
  Fly   984 HAIFI-----------DLGRTFPNHQFYKDPLGLGQLSLFNLLKAYSILDPELGYCQGLG-FICG 1036

  Fly   489 ILEIQVNEVDTFWCF--VGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNM 551
            :|.:..:|.::|...  :.|...:.|.:..|....:.|..|:.||::.....|:.::..:|....
  Fly  1037 VLLLHCDEANSFQLLKHLMFRRNMRTKYLPDMKKFQLQLYQLSRLVKDHLPDLYVWLDQNDVSPT 1101

  Fly   552 YFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQETRVIIDSQYEFTEILKH 616
            .:...|:|..:..:.....|.::::.|:  |...:....|::|:|....:.:: ::..|.||:.:
  Fly  1102 LYAAPWILTVFSSQFPLGFVARVFDLLF--LESSDVIFKFAIALLSVHKQQLL-AKDNFEEIMDY 1163

  Fly   617 VNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSIIGEPLLPAAAGEEIDGGMVDEEPTYSDD 681
            :..:...::.....|:.:.::             ...||:.|    |..:::..::.||.|.::.
  Fly  1164 LKTVVPKMEHTCMEQIMKLVF-------------SMDIGKQL----AEYKVEYNVLQEEITTTNH 1211

  Fly   682 GFDELVKELTPEEKVRQQ 699
            ..:.|.:|.|..:.:.||
  Fly  1212 HLEMLNREKTQNQHLEQQ 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 23/101 (23%)
TBC 369..598 CDD:214540 50/232 (22%)
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 835..880 CDD:288663 6/54 (11%)
TBC 933..1152 CDD:214540 51/239 (21%)
RILP-like <1176..1267 CDD:304877 13/71 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456544
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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