DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and Tbc1d14

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001106836.1 Gene:Tbc1d14 / 360956 RGDID:1309993 Length:714 Species:Rattus norvegicus


Alignment Length:682 Identity:138/682 - (20%)
Similarity:234/682 - (34%) Gaps:217/682 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GVLLKKASAEHIADLNTSGSL---------------SLVEYSR-SIAEMPRRRLLLEWQPNDSIM 95
            |:::|.:|...:.|.|.|.|:               ||.|... ||..:||...:.::.|...:.
  Rat    10 GLMVKVSSWTKMTDGNLSTSMNGVALMGILDGRPGDSLQELQHLSIKAVPRSLSVPDYGPTLKLG 74

  Fly    96 IADD-----SQDQGDWAL--------------VDRISGRTRTTSECRAFNT-------RPIEPSG 134
            ..:|     |.|.|...|              |.|....:....| |||.:       .|..|:|
  Rat    75 ALEDRHSLQSVDSGIPTLEIGNPEPVPCSVVHVKRKQSESEIIPE-RAFQSACPLPSCTPSAPTG 138

  Fly   135 GATTRSRVMRAQLEDLSSVEVRHRGQTIR----FMRKGANGVHSEFFFQHGNA-----DLFV--- 187
            .                     .|.|.:|    |.|.|.:.|  :.:.....|     |:.|   
  Rat   139 S---------------------EREQAVRKSSTFPRTGYDSV--KLYSPTSKALSRSDDVSVCSV 180

  Fly   188 ----------RSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIK-ASQLPRESW 241
                      .|:.::.:::...||.|.    ||:|.||.. ...|.::.:..|| .|.|.::..
  Rat   181 SSLGTELSTTLSVSNEDILDLMVTSNSS----AIVTLENDD-DPQFTDVTLSSIKETSDLHQQDC 240

  Fly   242 LPNKLAG-----------------------------------ILGNIP--DYVQPPFQRSPK--- 266
            :.....|                                   :.|.:|  :..|...:::.|   
  Rat   241 VAETEEGRKLRLLQPFSHFFTRNLLARKQNARLDRQRDLGWKLFGKVPLRETAQKDSKKTQKEYE 305

  Fly   267 ---SRPGVLISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIV 328
               .||      .|..||.......|.....|..:...:.|..:....||:...:.....:|.:|
  Rat   306 DKAGRP------SRPPSPKQNVRKNLDFEPLSTTALILEDRPANLPAKPAEEAQKHRQQYEEMVV 364

  Fly   329 --------------NNLPDRQRVER--GH----------PLTETQWLEFQTPDGRISDSARIKEL 367
                          ..|.:|.:||.  |:          |..||.|.           |.::::|
  Rat   365 QAKKRELKEAQRRKKQLEERCKVEESIGNAVLTWNNEILPNWETMWC-----------SKKVRDL 418

  Fly   368 IFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNM-----KAQWLAMTT------ 421
            .:: |:..|:|.:||...:...| :.||            |.:::     |.:|.:::|      
  Rat   419 WWQ-GIPPSVRGKVWSLAIGNEL-NITH------------ELFDICLARAKERWRSLSTGGSEVE 469

  Fly   422 TQEANF-CGYRERKCQIEK-DVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSD 484
            .::|.| ...||...::.| |:.||..:|..|. :..|...:|..||..|..|..|:||||||| 
  Rat   470 NEDAGFSAADREASLELIKLDISRTFPNLCIFQ-QGGPYHDMLHSILGAYTCYRPDVGYVQGMS- 532

  Fly   485 LLAPILEIQVNEVDTFWCFVGFM----ELVFTNFDIDQAGMKTQFAQIRRLIEFANAP-LFNYMR 544
            .:|.:|.:.::..|.|..|...:    ::.|  |.:|...|.|.||......| .|.| ||.:.:
  Rat   533 FIAAVLILNLDTADAFIAFSNLLNKPCQMAF--FRVDHGLMLTYFAAFEVFFE-ENLPKLFAHFK 594

  Fly   545 SHDSDNMYFCFRWLLVWYKRELNSEDVLKLWE 576
            .::.....:...|:...|.:.|..:...::|:
  Rat   595 KNNLTADIYLIDWIFTLYSKSLPLDLACRIWD 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 40/207 (19%)
TBC 369..598 CDD:214540 57/226 (25%)
Tbc1d14NP_001106836.1 DUF4207 147..384 CDD:290615 39/249 (16%)
TBC 419..651 CDD:214540 57/227 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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