DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and Tbc1d2b

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_006243590.1 Gene:Tbc1d2b / 315880 RGDID:1307436 Length:963 Species:Rattus norvegicus


Alignment Length:721 Identity:145/721 - (20%)
Similarity:262/721 - (36%) Gaps:171/721 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVRYDR---CHQVQLGVFNESQLSSVEEDVQNLPQQGTGNILFTHDGVLLKKASAEHIADLNTS- 64
            |.:||:   .||:..||..::.....::|.|.|...|.    ....| |.|::..:.:..|.:. 
  Rat   374 SSQYDKYFMSHQISQGVPRDTLELLHQKDEQILGLSGQ----LERFG-LEKESLQQEVRTLKSKV 433

  Fly    65 GSLSLVEYSRSIAEMPRRRLLLEW-QPNDSIMIADDSQDQGDWALVDRISGRTRTTSECRAFNTR 128
            |.|:           .|..:|:|. |..|.::|                     ..|||....:.
  Rat   434 GELN-----------ERLGMLMETIQAKDEVII---------------------KLSECEGSVSS 466

  Fly   129 P-IEPSGGATTRSRVMRAQLEDLSSVEVRHRGQT---------IRFMRKGANGVHSEFFFQHGNA 183
            | :.||....|.:...:.:|:.|......::.|.         :..:|:.|.....:...::.:.
  Rat   467 PTMGPSSPLATPASRDQLELDRLKDSLQGYKSQNKFLNKEILELSALRRNAERRERDLMAKYSSL 531

  Fly   184 DLFVRSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAEL--DIGQIKASQLPRESWLPNKL 246
            :..:..:..::||...|...      .:.:.|....:...|:|  |..|:::.:.|.::      
  Rat   532 EAKLCQVESKYLILLQEMKT------PVCSEEQGPARDVIAQLLEDALQVESQEQPEQA------ 584

  Fly   247 AGILGNIPDYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKS 311
                     :|:|.           |:|        .:.|.|.                   ...
  Rat   585 ---------FVKPH-----------LVS--------EFDIYGF-------------------RTV 602

  Fly   312 PADSELETL----NAQDEKIVNNLPDRQRVERGHPLTETQWLEF--QTPDGRISDSARIKELIFR 370
            |.|.|.|.|    .|.|.|.: .|.:.|.|..|     .:|..:  .|.:..:..|..:|.|| |
  Rat   603 PDDDEEEKLVAKVRALDLKTL-YLTENQEVSTG-----VKWENYFASTMNREMVCSPELKNLI-R 660

  Fly   371 GGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIE--YYNMKAQWLAMTTTQEANFCGYRER 433
            .|:....|.:|||       |.   |:|..|:.:.|:|  |:    |.|.....::.|     ..
  Rat   661 AGIPHEHRSKVWK-------WC---VDRHTRKFKDSMEPGYF----QALLQKALEKQN-----PA 706

  Fly   434 KCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVD 498
            ..|||.|:.||..:.:.::...:..:..|:.:|:.:...|.|:||.||::.|:|..| :.:.:.|
  Rat   707 SKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVAL-LYLEQED 770

  Fly   499 TFWCFVGFMELVFTNFDIDQAGMKTQFAQ--IRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVW 561
            .|||.|..:|:........:..:.:|..|  .|.|:......|..:...:..|.....|.|.||.
  Rat   771 AFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLLSEKLPRLHTHFEQYKVDYTLITFNWFLVV 835

  Fly   562 YKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNI-D 625
            :...:.|:.:.|:|:......|...|.  |::|:...:...|:..| :...|.|::...:..| |
  Rat   836 FVDSVVSDILFKIWDSFLYEGPKVIFR--FALALFKYKEEEILKLQ-DSMSIFKYLRYFTRTILD 897

  Fly   626 VQKTLQVAEGIYLQLKGSETLPNDIRSI-------IGEPLLPAAAGEEIDGGMVDEEPTYSDDGF 683
            .:|...::.|        :..|..:|.|       :.:..|.....|.|....:.|..|..|.| 
  Rat   898 ARKLTSISFG--------DLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERDTSPDKG- 953

  Fly   684 DELVKE 689
             |||.:
  Rat   954 -ELVSD 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 25/165 (15%)
TBC 369..598 CDD:214540 56/232 (24%)
Tbc1d2bXP_006243590.1 PH_TBC1D2A 36..144 CDD:269966
PH 38..136 CDD:278594
HIP1_clath_bdg <339..>376 CDD:293123 1/1 (100%)
DUF1664 <346..436 CDD:285172 16/66 (24%)
RabGAP-TBC 708..876 CDD:278964 40/170 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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