DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and Tbc1d25

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001100425.1 Gene:Tbc1d25 / 302552 RGDID:1559711 Length:688 Species:Rattus norvegicus


Alignment Length:499 Identity:139/499 - (27%)
Similarity:218/499 - (43%) Gaps:99/499 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 TTSECR--AFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGVHSEF---- 176
            |||...  |.:..| .|.|||:..:.|   :.|:...|.||        ::|..:.:..||    
  Rat     3 TTSAASDLACSAAP-SPVGGASAAAAV---EEEEREVVRVR--------VKKCESFLSPEFRSFA 55

  Fly   177 ---------FFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFA-------- 224
                     ..||.....|..:.:....|......|.|.|.:..|.:: ..|...||        
  Rat    56 VDPQITSLDVLQHILIRAFDLNGKKNFGISYLARDRLGQEAFLSLLSD-WDLSTAFATASKPYLQ 119

  Fly   225 -ELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPG--VLISGDRQTS------ 280
             .:||...:.|.| .|.|             |.:      |||...|  ||:: |:::|      
  Rat   120 LRVDIRPSEDSPL-LEDW-------------DII------SPKDVIGSDVLLA-DKRSSLTTAAL 163

  Fly   281 PDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTE 345
            |....|:...|.|                .|.....|.....:|.|     |.:.      ||::
  Rat   164 PFTQSILSQVGRT----------------LSKVQQVLSWSYGEDVK-----PFKP------PLSD 201

  Fly   346 TQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYY 410
            .::..:...:|::|....::..|:.|||..|||..||::|||.|....|..||::..|:||.||.
  Rat   202 AEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYE 266

  Fly   411 NMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAG-EDNPNLTLLQGILMTYVMYNF 474
            .:|::|......::..|.     :..:.|||.||||:..::|| ||.|:|..|..:|.||.:.:.
  Rat   267 QLKSEWAQRVNPEDLEFI-----RSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHP 326

  Fly   475 DLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPL 539
            .:.|.||||||.:|||.:..:|...|.||.|.|:.:..||..|...|.|:||.::.|:..|:...
  Rat   327 QVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDF 391

  Fly   540 FNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLP 583
            :.|::...:|:::||:||||:..|||...:|.|::.|..|:.||
  Rat   392 YQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLP 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 20/87 (23%)
TBC 369..598 CDD:214540 82/216 (38%)
Tbc1d25NP_001100425.1 TBC 225..454 CDD:214540 82/216 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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