DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and Tbc1d17

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001099728.1 Gene:Tbc1d17 / 292886 RGDID:1309686 Length:646 Species:Rattus norvegicus


Alignment Length:663 Identity:217/663 - (32%)
Similarity:308/663 - (46%) Gaps:107/663 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ILFTHDGVLLKKASAEH-IADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQP----NDSIMIADDS 100
            ::|...||.|..::.:| ..|...:|.|.:||....:        ||.|.|    .|...|....
  Rat     8 VVFEKGGVYLHTSARKHQDPDSLIAGVLRVVEKDNDV--------LLHWAPVEEAGDPTQIFFSK 64

  Fly   101 QD-------------------QGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQ 146
            :|                   :.|||::..:..|.. .:|.|    |..|||  :...|......
  Rat    65 KDPSGGEPSTSEEEPTFDPGYEPDWAVISTVRPRPH-LAEPR----RGAEPS--SPRSSWAFSVS 122

  Fly   147 LEDLSSVEVRHRGQTIRF--MRKGANGVHSEFFFQHGNADLFVRSMRDQHLIENAETSRSGGEVY 209
            |.:|.|:.....|.:..:  :...|.|......|..|.....:|.:....|:   .:|.....:|
  Rat   123 LGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLL---ASSPQDSRLY 184

  Fly   210 AILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQR--SPKSRPGVL 272
            .:...:...|..:|..|.:....:|.:                :..::|.|:..  |..||....
  Rat   185 LVFPQDPSALSDSFHHLQLFDQDSSNV----------------VSRFLQDPYSTTFSSFSRVTNF 233

  Fly   273 ISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSP--ADSE----LETLNAQDEKIVNNL 331
            ..|..|..|:                      |.|:...|  .|.|    .|.::..:      |
  Rat   234 FRGALQPHPE----------------------GASSPDLPPLPDDEPEPGFEVISCVE------L 270

  Fly   332 PDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHV 396
            ..|..|||..|:||.:|.....|:||:.:...:|..||.||:...||.|.|||||.|..|..:..
  Rat   271 GQRPTVERAPPVTEEEWNRHVGPEGRLQNVPELKSRIFSGGLSPGLRREAWKFLLGYLSWESSAE 335

  Fly   397 ERIERRKQKSIEYYNMKAQWLAMTTTQEAN---FCGYRERKCQIEKDVKRTDRSLQFFAGEDNPN 458
            |.....::|:.||:.||.||.:::..||..   ..|||.   .||:||.||||:.:|:.|.:||.
  Rat   336 EHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRS---LIERDVSRTDRTNKFYEGPENPG 397

  Fly   459 LTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKT 523
            |.||..||:||.||:|||||||||||||:|||.:..||||.||||.||||||..||:..|..||.
  Rat   398 LGLLNDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETMKR 462

  Fly   524 QFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPNFH 588
            |..|:..|:...:.||.:::.|.||.::.|||||||:|:|||....|||:|||.|||.||.||.|
  Rat   463 QLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLH 527

  Fly   589 LLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSI 653
            ||.:.||||.|...::.|.:...|||||:|||:..:.|:..|..||.:|.||.....||::::.|
  Rat   528 LLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVEDVLTRAEALYRQLTACPELPHNVQEI 592

  Fly   654 IG-----EPLLPA 661
            :|     ||..|:
  Rat   593 LGLAQPEEPSSPS 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 37/175 (21%)
TBC 369..598 CDD:214540 120/231 (52%)
Tbc1d17NP_001099728.1 DUF3548 3..218 CDD:192931 44/243 (18%)
TBC 308..543 CDD:214540 122/237 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 252 1.000 Domainoid score I2022
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 1 1.000 - - FOG0002107
OrthoInspector 1 1.000 - - otm45654
orthoMCL 1 0.900 - - OOG6_101355
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1395
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.780

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