DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc-14

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001317776.1 Gene:tbc-14 / 174986 WormBaseID:WBGene00008444 Length:630 Species:Caenorhabditis elegans


Alignment Length:662 Identity:228/662 - (34%)
Similarity:329/662 - (49%) Gaps:116/662 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDS-----IMIADDSQDQGDWALV 109
            |.:.|.|:|     .|:||:||.|..:        .:||:|::.     :|.:||    |:..:|
 Worm    48 LGEDSKEYI-----PGTLSIVEKSSGV--------FIEWKPSEDAETSWVMTSDD----GNTEMV 95

  Fly   110 DRISGRTRTTSECR-AFNTRPIEPSGGATTRSRVMRAQLEDLSSVE----VRHRGQ----TIRFM 165
            ...|...:.....| ||:                  ..:.||||..    .|..|.    :||.:
 Worm    96 HARSPEEKQKCGARVAFS------------------MDVNDLSSFRNDEPKRDSGSGGFPSIRLI 142

  Fly   166 -RKGANGVHSEFFFQHGNADLFV----------RSMRDQHLIENAETSRSGGEVYAILTTENQKL 219
             |.|::.|  ..||::.....|:          ||.||.||:             .::..:::.|
 Worm   143 CRDGSSQV--PLFFKNTTTAEFLDRLQGYITLRRSHRDSHLV-------------IVVDQKSEAL 192

  Fly   220 KKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVLISGDRQTSPDNY 284
            .|:.:.||......|:..:..:: ..:.| ...|..:||      .:..|.||...|..|..:..
 Worm   193 AKSVSMLDENGDILSRFMQNPYM-TAMTG-FSKITSFVQ------DQVIPSVLNDTDAVTQEEKI 249

  Fly   285 QIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWL 349
            :::      .....:..|.|    ..|.|..|.|.:...:      ||.|..:.|..|:::..|.
 Worm   250 RLM------RELRLAEEQMR----VHSDAAGEFEVVTQLE------LPPRPEIYRELPVSKDLWN 298

  Fly   350 EFQTPDGRISDSARIKEL---IFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYN 411
            .|:..:|.. |..::..|   :||||:...||.|.||.||.|..|.::..:...||.:.:.:|.|
 Worm   299 SFKLSNGSY-DPMKLHHLKMNVFRGGLNAELRKEAWKCLLGYRQWHESDTDFQTRRAELAKQYEN 362

  Fly   412 MKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYVMYNFDL 476
            ||.||:::|..||..|..:.:||..:||||.||||::.||.|:||.||..|..:|||||||||||
 Worm   363 MKKQWMSVTEDQEKRFTKFVKRKSLVEKDVARTDRTVPFFQGDDNVNLVHLHNVLMTYVMYNFDL 427

  Fly   477 GYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFN 541
            ||||||||..:|:|.:..:||||||||||.|||...||:.|||.:|.|..|:|.|:...|..|.|
 Worm   428 GYVQGMSDFASPLLFVMKDEVDTFWCFVGLMELTQKNFETDQAFIKLQMNQLRDLVMIINPKLAN 492

  Fly   542 YMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQETRVIIDS 606
            |:.|..||:|||||||:|||:|||.:..|..||||.||:..|||.|.||..|||||.:|.:|||:
 Worm   493 YLESEKSDDMYFCFRWVLVWFKREFSFLDTCKLWEVLWSGQPCPRFLLLICVAILDSQTNIIIDN 557

  Fly   607 QYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSET-LPNDIRSI--IGEPLLPAAAGEEID 668
            |:..||||||:|:||.::.|.:.|..||.|:.||..|:. ||..|...  |||..:.::      
 Worm   558 QFGLTEILKHINDLSMHLKVDEILTAAEAIFHQLSASQNKLPAHICQYLNIGESAVSSS------ 616

  Fly   669 GGMVDEEPTYSD 680
                :..|:.||
 Worm   617 ----NNSPSKSD 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 38/165 (23%)
TBC 369..598 CDD:214540 124/228 (54%)
tbc-14NP_001317776.1 DUF3548 51..197 CDD:371881 43/195 (22%)
TBC 320..555 CDD:214540 126/234 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159849
Domainoid 1 1.000 255 1.000 Domainoid score I1106
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2574
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1495285at2759
OrthoFinder 1 1.000 - - FOG0002107
OrthoInspector 1 1.000 - - oto17465
orthoMCL 1 0.900 - - OOG6_101355
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1395
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.660

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