DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc-17

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001022434.2 Gene:tbc-17 / 174900 WormBaseID:WBGene00012894 Length:1073 Species:Caenorhabditis elegans


Alignment Length:528 Identity:98/528 - (18%)
Similarity:184/528 - (34%) Gaps:159/528 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PSGGATTRSRVMRAQLEDLSSV------EVRHRGQTIR--FMRKGANGVHSEFFFQHGNADLFVR 188
            |.|.|:|..| ..|.|:|..:|      |..||..|.:  ....|.:|::....:|..       
 Worm   415 PYGSASTNMR-ETAILDDYDNVPSEFLAENVHRKHTTKDDVKEDGESGIYQPGRYQPS------- 471

  Fly   189 SMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNI 253
                    |:|::|....:             ..:.||         :.|:|.:.....|     
 Worm   472 --------EDADSSSDEDD-------------PEYLEL---------MERDSIINRYEKG----- 501

  Fly   254 PDYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELE 318
            ||........:|        :.:..|:.|.:..:...|                 ||:.||   |
 Worm   502 PDAADVDAWENP--------NFELYTNLDRFGFVHKKG-----------------EKATAD---E 538

  Fly   319 TLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGGVVQSLRPEVWK 383
            ..:.|..:|:..|.           .|.:||:..........|.::::.|:: |:.:.||..:|.
 Worm   539 RTDLQKRRIIKELS-----------REKKWLKMIEVWKSGGPSKKMEDRIWK-GIPEKLRIVIWP 591

  Fly   384 FLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRS- 447
            .||.        .||::..::.......::|:.::            ::.| ||:.|:.||.|. 
 Worm   592 RLLG--------AERLKHERRDVYAELLLRARLVS------------KDIK-QIDLDINRTYRDH 635

  Fly   448 LQFFAGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWC---------- 502
            |.|....|....:|| .:|..|.|:|.::||.||||.:.|..| :.::|.|.||.          
 Worm   636 LAFRKRYDVKQKSLL-NVLAAYSMFNTEVGYCQGMSQIAALFL-MYLDEEDAFWSLHQLMVSPKH 698

  Fly   503 -----FV-GFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVW 561
                 || ||.:|            :......:|:::.....::.::...|...:|.. :|....
 Worm   699 TMHGFFVPGFPKL------------QRYEEHFKRVLKKYKPRVYKHLEKQDIPYIYLT-KWWFGC 750

  Fly   562 YKRELNSEDVLKLWECLWTRLPCPNFHLLFSVAILDQ---------------ETRVIIDSQYEFT 611
            :...:.....|:||:.......|....:.:::..:.:               :..:.||..|...
 Worm   751 FLDRVPFSLALRLWDVFLVEGDCILIAMAYNIMKMHEKNVRKHNMESFMEFIQNDIAIDFGYSDD 815

  Fly   612 EILKHVNE 619
            |::..:.|
 Worm   816 EVMHSLRE 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 16/66 (24%)
TBC 369..598 CDD:214540 50/245 (20%)
tbc-17NP_001022434.2 TBC 577..788 CDD:214540 51/247 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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