DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tbc1d15-17 and tbc1d10c

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_005173203.1 Gene:tbc1d10c / 101887140 ZFINID:ZDB-GENE-130125-1 Length:1383 Species:Danio rerio


Alignment Length:454 Identity:88/454 - (19%)
Similarity:153/454 - (33%) Gaps:136/454 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 ETQWLEFQTPDGRISD--SARIKELIFRGGVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSI 407
            |::||...|...::.:  |.::|... :.|:..|:|.:.|..|..           .:.||:|:.
Zfish    50 ESKWLGLMTQWEQVMEKKSHKVKSQC-QKGIPASVRIKCWPLLCG-----------AKDRKEKNS 102

  Fly   408 EYYNMKAQ------WLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQF---FAGEDNPNLTLLQ 463
            ..||...:      |:.:                 |::|   |||...|   |..:|......|.
Zfish   103 TLYNSLVEAPDHQGWIEI-----------------IKRD---TDRQFPFHEMFLSKDGHGQKDLL 147

  Fly   464 GILMTYVMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFD--------IDQAG 520
            .:|..|..|..|.||.|.... :|.:|.:.:...:.|||.|...||....:.        .|.|.
Zfish   148 EVLKAYTQYRPDEGYCQAQGP-VAAVLLMNMPAEEAFWCLVQISELYLPGYYSPLLEGVLFDAAV 211

  Fly   521 MKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECLWTRLPCP 585
            :.   :.:::|...|:    .:::....:.:.|...||:..:.|.|....:|::|:..:    |.
Zfish   212 LS---SVLKKLCPAAH----KHLQGQGVEPLMFATDWLMCLFSRHLPFNTLLRVWDLFF----CY 265

  Fly   586 NFHLLFSVAIL-------DQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQL--- 640
            ...:||.||::       |...|...|.|.|..|.|:.|.:...|......:.....:.|.|   
Zfish   266 GVRVLFQVAVVLVRRCLGDGRLRKECDGQMETLERLRSVKQRVQNEQTDAFINEVCSVSLSLADL 330

  Fly   641 -------------------------------------------------KGSETLP-NDIRSIIG 655
                                                             |||.|:| ....|.:.
Zfish   331 QKQTEKELEKWKKDRPNSTFDPRGRCHGHRMAWERAQNKQKEQEKKERQKGSLTIPIMRSHSSLS 395

  Fly   656 EPLL--------PAAAGEEIDGGMVDEEPTYSDDGFDELVKE-----LTPEEKVRQQALLEEAC 706
            ..||        .....||.|||......:..::..:|.::.     :..|:|.:|..||::.|
Zfish   396 PSLLRKKWRKRSSKTDTEEWDGGGRKSTRSLMEESDEEEIRRRSLCAVIGEQKAKQDRLLDDLC 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 51/252 (20%)
tbc1d10cXP_005173203.1 TBC 77..278 CDD:214540 51/243 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.