DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbc1d15-17 and tbc1d12b

DIOPT Version :9

Sequence 1:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_005169505.1 Gene:tbc1d12b / 100332088 ZFINID:ZDB-GENE-121214-108 Length:771 Species:Danio rerio


Alignment Length:697 Identity:140/697 - (20%)
Similarity:229/697 - (32%) Gaps:196/697 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DRCHQVQLGVFNES--------QLSSVEE-------DVQNLPQQGTGNILFTHDGVLLKKASAEH 57
            ||...:..|:|:.|        ||.|.:|       |..|||           .|..|....|.|
Zfish    54 DRQENIMQGMFSNSGASQREKGQLQSSQEHEATESCDEVNLP-----------CGAKLPNGHASH 107

  Fly    58 IA-------DLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQDQGDWALVDRISGR 115
            .|       ..:.:||....|....||             |..:::  ||...||.......||.
Zfish   108 NAPERVACKSSSPAGSCVSSEDDHGIA-------------NGELLV--DSGSAGDAVSSAFCSGE 157

  Fly   116 TRTTS----ECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGVHSEF 176
            |...:    |.:|..|.........::....:..|..:.:..::..|..|.....|.:....|..
Zfish   158 TPDEAGESLETQAGETLEALDQAERSSTDHCLGLQSSECNEGKLHRRSSTSPSPLKHSLRTFSSS 222

  Fly   177 FFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESW 241
            .|.  |.|....|..|..  :..||          .:|.::.....|.::.:......::.|...
Zfish   223 TFL--NTDSASLSPNDDD--DEDET----------FSTSDRPDDLRFMDVSLKSRNTYEISRRQS 273

  Fly   242 LPNKLAGILG-------------NIPDYVQPPF----QRSPKSRPGVLISG-------------- 275
            .|:.:.|:|.             .|.|......    ||..:|.||..:.|              
Zfish   274 APDNIPGVLSVAAVDLTLGQRKQGISDIFSRSLFTRKQREAQSAPGWKLFGKVPLRESPPKDSKT 338

  Fly   276 -DRQTSPDNYQIIGL-----SGSTNSACSSNGQSRGGSAEKSPADSELETLNA-----QDEKIVN 329
             .::::|.|...:..     ||...:....:|||....|:....:.|.|.|:.     :|...  
Zfish   339 IQQESNPGNLTSVSTPNLLSSGEYEAKVCKSGQSPSLPAQSRRKNLEFEPLSTTALILEDRPA-- 401

  Fly   330 NLP-------DRQRVERGHPLTETQWLEFQTPDGR------------------------------ 357
            |||       .|.|.|....:.|.:..|.:....:                              
Zfish   402 NLPAKSEEEAQRHRQEYDEMVAEAKKRELKEAQKKKKQMKERFKQEESIANAMVVWNTEILPNWE 466

  Fly   358 -ISDSARIKELIFRGGVVQSLRPEVWKFLLNYYL--WSDTHVERIERRKQKSIEYYNMKAQWLAM 419
             :..:.|:::|.:: |:..::|.:||...:...|  .||.:...:.|.|::          |.: 
Zfish   467 SMRGTRRVRDLWWQ-GLPPNVRGKVWSLAVGNELNITSDLYEIFLSRAKER----------WKS- 519

  Fly   420 TTTQEANFCGYRERKCQIEKDVKRTDR--SLQ-------------FFAGEDNPNLTLLQGILMTY 469
                      :||...:||.||...||  ||.             |...:..|...||..:|..|
Zfish   520 ----------FRETGSEIESDVDSADRESSLDLIKLDISRTFPSLFIFQKGGPYHDLLHSVLGAY 574

  Fly   470 VMYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFM----ELVFTNFDIDQAGMKTQFAQIRR 530
            ..|..|:||||||| .:|.:|.:.:.|.|.|..|...:    ::.|  |.:|...|...||....
Zfish   575 TCYRPDVGYVQGMS-FIAAVLILNLEEADAFIAFANLLNKPCQMAF--FRVDHELMLKYFAAFEV 636

  Fly   531 LIEFANAP-LFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWE 576
            ..| .|.| |||:.:|::.....:...|:...|.:.|..:...::|:
Zfish   637 FFE-ENLPRLFNHFKSYNLTPDLYLIDWIFTLYAKSLPLDVACRVWD 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931 30/164 (18%)
TBC 369..598 CDD:214540 58/230 (25%)
tbc1d12bXP_005169505.1 TPX2 407..>451 CDD:284337 5/43 (12%)
TBC 478..708 CDD:214540 58/231 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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