DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11617 and HMLALPHA2

DIOPT Version :10

Sequence 1:NP_608502.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_009866.1 Gene:HMLALPHA2 / 850292 SGDID:S000000572 Length:210 Species:Saccharomyces cerevisiae


Alignment Length:87 Identity:27/87 - (31%)
Similarity:38/87 - (43%) Gaps:22/87 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKSTRPKRNRRHSRRAWPPEEELHPASRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLA 65
            ::|||:|.|..|                      ||.:..|:|:.|..:..||||...:..:.|.
Yeast   124 INKSTKPYRGHR----------------------FTKENVRILESWFAKNIENPYLDTKGLENLM 166

  Fly    66 AETGLTYTQICNWFANWRRKLK 87
            ..|.|:..||.||.:|.|||.|
Yeast   167 KNTSLSRIQIKNWVSNRRRKEK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_608502.1 homeodomain 29..90 CDD:238039 21/59 (36%)
HMLALPHA2NP_009866.1 HOX 135..188 CDD:197696 21/74 (28%)

Return to query results.
Submit another query.