DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and pknox1.1

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_571966.3 Gene:pknox1.1 / 798151 ZFINID:ZDB-GENE-020122-5 Length:433 Species:Danio rerio


Alignment Length:160 Identity:43/160 - (26%)
Similarity:71/160 - (44%) Gaps:34/160 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ASRATKRLFTP-DIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKL---- 86
            :|...||...| ....:::.||.:...:|||:.|||||:|.:|.||..|:.|||.|.||::    
Zfish   264 SSPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRILQPM 328

  Fly    87 ---KNSEREKAKKS----------WGHLIKNYNHNAR------------GNVEQFSISSED--SI 124
               .::|..|:||.          |...|.:.....:            .||:.|...|.|  ::
Zfish   329 LDANSTEASKSKKKVAQSRPLHRFWSDSIASTGSQQQLTMPDGSLVTVGMNVDGFQALSSDGATL 393

  Fly   125 WEEEMHSCPAEDDEGDD--NEEFSSHSTGS 152
            ..:::......:||.|:  ||:.:..||.:
Zfish   394 AMQQVLMGNHSEDETDESGNEDDTDMSTAN 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 19/37 (51%)
pknox1.1NP_571966.3 Meis_PKNOX_N 82..166 CDD:293102
Homeobox_KN 284..323 CDD:283551 20/38 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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