DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11617 and PKNOX1

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_004562.2 Gene:PKNOX1 / 5316 HGNCID:9022 Length:436 Species:Homo sapiens


Alignment Length:169 Identity:47/169 - (27%)
Similarity:68/169 - (40%) Gaps:54/169 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LH--PASRATKRLFTP-DIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRK 85
            ||  ..|...||...| ....:::.||.:...:|||:.:||||:||:|.||..|:.|||.|.||:
Human   252 LHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRR 316

  Fly    86 LKN-------SEREKAKKS----------WGHLIKNYNHNARG---------------------- 111
            :..       ||..|.||.          |...|      |.|                      
Human   317 ILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSI------ASGVAQPPPSELTMSEGAVVTITTP 375

  Fly   112 ---NVEQF-SISSEDSIW--EEEMHSCPAEDDEGDDNEE 144
               ||:.. |:||:.:..  ::.|.:..:||:..|..||
Human   376 VNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 19/37 (51%)
PKNOX1NP_004562.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Meis_PKNOX_N 80..165 CDD:406806
Homeobox_KN 277..316 CDD:399131 20/38 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..436 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.