DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and pknox2

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_705940.1 Gene:pknox2 / 386959 ZFINID:ZDB-GENE-031118-112 Length:474 Species:Danio rerio


Alignment Length:156 Identity:39/156 - (25%)
Similarity:62/156 - (39%) Gaps:50/156 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKL------------------KN 88
            :::.||.:...:|||:.:||:|:||:|.||..|:.|||.|.||::                  ..
Zfish   302 IMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKMK 366

  Fly    89 SEREKAKKSWGHLI---------KNYNHNARG--NVEQFSISS---------------------E 121
            |:....::.|...|         .|.:.|:.|  .::..|..|                     |
Zfish   367 SQHRPTQRFWPDSIVAGVLQTHGTNNSDNSLGMDGLQPLSSDSATLAMQQAMLGGTDDSMDGTEE 431

  Fly   122 DSIWEEEMHSCPAEDDEGDDNEEFSS 147
            :...|||......:|||.||.|..:|
Zfish   432 EDEEEEEDEGLDEDDDEEDDEEHEAS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 18/37 (49%)
pknox2NP_705940.1 Meis_PKNOX_N 95..178 CDD:293102
Homeobox_KN 306..345 CDD:283551 19/38 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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