DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and achi

DIOPT Version :10

Sequence 1:NP_608502.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster


Alignment Length:227 Identity:56/227 - (24%)
Similarity:81/227 - (35%) Gaps:32/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRK-LKNSEREKAKKSWGHLIKN 104
            ::||.||...|.|.|||..||..|:.|..||..|:||||.|.||: |....|.:........|..
  Fly   106 KILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEMIRREGNDPLHFTISR 170

  Fly   105 YNHNARGNVEQFSISSEDSIWEEEMHSCPAEDDEGDDNEEFSSHSTGSDGNANNEPSSPYKPILF 169
            .......|..:.|....:.......|..||.:......||........:|.||         :| 
  Fly   171 RGKKVSPNCSRSSALGANLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIAN---------VL- 225

  Fly   170 VGSAGLTERISAQTGGKTKYKHQMMEKYMRDSSTAKTTSQQGTQLNKWLESAAKFTP-DR-NNYH 232
               ....:.:....|...|.:.:..:..:.....|...:..|.|.   |.|:.:.|. |: .||.
  Fly   226 ---TNFEQYVQGPNGQMVKMEPEYEDSVIYSWQQAIANNPMGFQS---LHSSLQATMIDKIKNYQ 284

  Fly   233 IEWNMTRQKASSNSSCGQAIFTTDVSGAGRGG 264
            :      :||:       ||..:.|...|.||
  Fly   285 M------RKAA-------AIGGSAVGSGGAGG 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_608502.1 homeodomain 29..90 CDD:238039 24/49 (49%)
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 19/37 (51%)

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