Protein Alignment CG11617 and lhx3

DIOPT Version :10

• Sequence 1: NP_608502.1
• Gene: CG11617 / 33183
• FlyBaseID: FBgn0031232
• Length: 294
• Species: Drosophila melanogaster
• Sequence 2: XP_073805886.1
• Gene: lhx3 / 30455
• ZFINID: ZDB-GENE-980526-131
• Length: 411
• Species: Danio rerio
• Alignment Length: 285
• Identity: 68/285 - (23%)
• Similarity: 104/285 - (36%)
• Gaps: 70/285 - (24%)

  Fly    27 ASRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSER 91
            |....||..|....:.|:........:|.|:|..::||:.||||....:..||.|.|.|.|..::
Zfish   163 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKEKRLKK 227

  Fly    92 EKAKKSWGHLIKNYNHNARGNVEQFSISSEDSIWEEEMHSC--------PAEDDEGDDNEEFSSH 148
            :..::.||...:|.. .:||:    |.|.:||..|:.|.|.        |...|.|..|..:||.
Zfish   228 DAGRQRWGQYFRNMK-RSRGS----SKSDKDSTQEDGMDSDAEVSFTDEPPMSDLGHSNGIYSSL 287

  Fly   149 STGSDG---NANNEPSSPYKPILFVGSAGLTERISA-------QTGGKTK--YKHQ-MMEKYMRD 200
            |..|..   ...|.|:.|.:....:.|......|.|       |:.|..:  .:|| ::...:..
Zfish   288 SESSPALSRQGGNHPAFPLEHGAIIPSQEPYHDIQASSPYSLPQSPGPLQPLPRHQPLISSLVYP 352

  Fly   201 SSTAKTTSQQGTQLNKWLESAAKFTPDRNNYHIEWNMT---RQKASSNSSCGQAIFTTDVSGAGR 262
            .|......|.|.|                      |||   |..|:.|..      ::|:|....
Zfish   353 ESGLPMVGQSGGQ----------------------NMTPGVRMMAAGNGP------SSDLSTGSS 389

  Fly   263 GG---------RWMLHHKDELEAAE 278
            ||         .|:    ||::.|:
Zfish   390 GGYPDFPASPASWL----DEVDHAQ 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11617	NP_608502.1	homeodomain	29..90	CDD:238039	19/60 (32%)
lhx3	XP_073805886.1	None