Protein Alignment CG11617 and Mkx

DIOPT Version :10

• Sequence 1: NP_608502.1
• Gene: CG11617 / 33183
• FlyBaseID: FBgn0031232
• Length: 294
• Species: Drosophila melanogaster
• Sequence 2: NP_001419214.1
• Gene: Mkx / 291228
• RGDID: 1305652
• Length: 356
• Species: Rattus norvegicus
• Alignment Length: 300
• Identity: 91/300 - (30%)
• Similarity: 127/300 - (42%)
• Gaps: 64/300 - (21%)

  Fly     6 RPKRNRRHSRRAWPPEEELHPASRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGL 70
            ||....||.|:|                  ..|:.|.||.||.:.|:||||::.||..||..:.:
  Rat    65 RPGGKVRHKRQA------------------LQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQM 111

  Fly    71 TYTQICNWFANWRRKLKNSEREKAKKSWGHLIKNYNHNARGNVEQFSISSEDSIWEEEMHSCPAE 135
            |..|:.|||||.||:|||:.|: ...||...||.||...:||.|:.|:||.|.       || :|
  Rat   112 TLVQVSNWFANARRRLKNTVRQ-PDLSWALRIKLYNKYVQGNAERLSVSSADD-------SC-SE 167

  Fly   136 DDEGDD----NEEFSSHSTGSDGNANNEPSSPYKPILFVGSAGLTE-RISAQTGGKTKYKHQMME 195
            |.|...    |||  .:||.:........||..|      :.|..| |.:.......|||..::.
  Rat   168 DGENPPRTHMNEE--GYSTPAHHTVIKGESSAIK------AGGRPESRAAEDYVSPPKYKSSLLN 224

  Fly   196 KYMRDS---STAKTTSQQGTQLNKWLESAAKFTPDRNNYHIEWNMTRQKASSNSSCGQAIFTTDV 257
            :|:.||   ..|.:|:..|....:  ..:..|:.:      |:.......||:.:.|..::.||.
  Rat   225 RYLNDSLRHVMATSTAMMGKTRRR--NHSGSFSSN------EFEEELVSPSSSETEGTFVYRTDT 281

  Fly   258 SGAG-------------RGGRWMLHHKDELEAAEALANLA 284
            ...|             ||......|..|:.||.||.|||
  Rat   282 PDIGSTKGDKGDSTANRRGPSKDDTHWKEINAAMALTNLA 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11617	NP_608502.1	homeodomain	29..90	CDD:238039	27/60 (45%)
Mkx	NP_001419214.1	Homeobox_KN	88..126	CDD:428673	18/37 (49%)