DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and Pknox2

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001025009.1 Gene:Pknox2 / 208076 MGIID:2445415 Length:474 Species:Mus musculus


Alignment Length:138 Identity:40/138 - (28%)
Similarity:62/138 - (44%) Gaps:40/138 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKL-------KNSE-REKAKKSW 98
            :::.||.:...:|||:.:||:|:||:|.||..|:.|||.|.||::       .|.: ..||||  
Mouse   302 IMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKK-- 364

  Fly    99 GHLIKNY---------NHNARGNVEQ------------------FSISSEDSIWEEEMHSCPAED 136
               ||:.         |..|.|.::|                  .|:||:::....:.....|.|
Mouse   365 ---IKSQHRPTQRFWPNSIAAGVLQQQGGTPGTNPDGSINLDNLQSLSSDNATMAMQQAMMAAHD 426

  Fly   137 DEGDDNEE 144
            |..|..||
Mouse   427 DSLDGTEE 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 18/37 (49%)
Pknox2NP_001025009.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
gliding_GltG 5..>77 CDD:411344
Meis_PKNOX_N 96..181 CDD:406806
Homeobox_KN 306..345 CDD:399131 19/38 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..371 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..405 1/19 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..474 6/12 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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