DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and Meis3

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_036008636.1 Gene:Meis3 / 17537 MGIID:108519 Length:400 Species:Mus musculus


Alignment Length:68 Identity:28/68 - (41%)
Similarity:42/68 - (61%) Gaps:2/68 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEELHPASRATKR--LFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWR 83
            :|:|....|..|:  :|......:::.||.:...:||||.|:|||||.:||||..|:.|||.|.|
Mouse   278 DEDLDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINAR 342

  Fly    84 RKL 86
            |::
Mouse   343 RRI 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 21/37 (57%)
Meis3XP_036008636.1 Meis_PKNOX_N 99..205 CDD:406806
Homeobox_KN 305..344 CDD:399131 22/38 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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