DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and Meis2

DIOPT Version :10

Sequence 1:NP_608502.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_011237639.1 Gene:Meis2 / 17536 MGIID:108564 Length:559 Species:Mus musculus


Alignment Length:59 Identity:27/59 - (45%)
Similarity:38/59 - (64%) Gaps:1/59 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RATKRLFTPDI-KRMLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKL 86
            |..||...|.: ..:::.||.:...:||||.|:|||||.:||||..|:.|||.|.||::
Mouse   358 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_608502.1 homeodomain 29..90 CDD:238039 27/59 (46%)
Meis2XP_011237639.1 Meis_PKNOX_N 129..213 CDD:465140
Homeobox_KN 377..415 CDD:428673 21/37 (57%)
Blue background indicates that the domain is not in the aligned region.

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