DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11617 and irx1b

DIOPT Version :9

Sequence 1:NP_001245817.1 Gene:CG11617 / 33183 FlyBaseID:FBgn0031232 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_571898.1 Gene:irx1b / 114430 ZFINID:ZDB-GENE-010716-1 Length:445 Species:Danio rerio


Alignment Length:234 Identity:61/234 - (26%)
Similarity:90/234 - (38%) Gaps:56/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AWPPEEELHPA------------SRATKRLFTPDIKRMLKDWLIRRRENPYPSREEKKQLAAETG 69
            |.||...:|.|            ..|..:..|.:....||.||...::||||::.||..||..|.
Zfish    94 AHPPGFAVHAAPGFYPYGQYQYGDPARAKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITK 158

  Fly    70 LTYTQICNWFANWRRKLKNSER----EKAKKSWGHLIKNYNH-NARGNVEQFSISSEDSIWEEEM 129
            :|.||:..||||.||:||...:    ..|:...|.:..:.|. :|..|      ..|:.|..|.:
Zfish   159 MTLTQVSTWFANARRRLKKENKVTCCRSAEDRDGRIFDSDNEDDADKN------DDEEEIDLETI 217

  Fly   130 HSCPAEDDEGDDNEEFSSH-------------------STGSDGNANNEPSSPYKPILFVGSAGL 175
            ....||:...|.|:|.:::                   :|.|..::.|...:..|.:..|...|.
Zfish   218 DMDKAEEPRVDQNKEAANNPHAIENIETPRILSSPALKNTDSPMSSGNREQNVVKSVGEVSPGGA 282

  Fly   176 TERISAQTGGKTKYKHQMMEKYMRDSSTAKT-TSQQGTQ 213
            .    .|..|.:|.|..         |.|:| ||...||
Zfish   283 V----CQRPGNSKPKIW---------SLAETATSPDNTQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11617NP_001245817.1 Homeobox_KN 46..84 CDD:283551 18/37 (49%)
irx1bNP_571898.1 COG5576 <114..206 CDD:227863 30/91 (33%)
Homeobox_KN 135..174 CDD:283551 19/38 (50%)
IRO 287..304 CDD:214716 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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