| Sequence 1: | NP_001285543.1 | Gene: | CG3436 / 33180 | FlyBaseID: | FBgn0031229 | Length: | 347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_004805.2 | Gene: | SNRNP40 / 9410 | HGNCID: | 30857 | Length: | 357 | Species: | Homo sapiens |
| Alignment Length: | 314 | Identity: | 193/314 - (61%) |
|---|---|---|---|
| Similarity: | 247/314 - (78%) | Gaps: | 0/314 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 32 ALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSG 96
Fly 97 HSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSD 161
Fly 162 DRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT 226
Fly 227 ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITS 291
Fly 292 GSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3436 | NP_001285543.1 | WD40 | <19..346 | CDD:225201 | 193/314 (61%) |
| WD40 | 50..342 | CDD:238121 | 177/291 (61%) | ||
| WD40 repeat | 58..96 | CDD:293791 | 17/37 (46%) | ||
| WD40 repeat | 102..138 | CDD:293791 | 19/35 (54%) | ||
| WD40 repeat | 143..180 | CDD:293791 | 22/36 (61%) | ||
| WD40 repeat | 186..221 | CDD:293791 | 17/34 (50%) | ||
| WD40 repeat | 227..267 | CDD:293791 | 28/39 (72%) | ||
| WD40 repeat | 277..313 | CDD:293791 | 24/35 (69%) | ||
| WD40 repeat | 319..342 | CDD:293791 | 13/22 (59%) | ||
| SNRNP40 | NP_004805.2 | WD40 | 62..351 | CDD:238121 | 176/288 (61%) |
| WD 1 | 64..103 | 22/38 (58%) | |||
| WD40 repeat | 70..107 | CDD:293791 | 17/36 (47%) | ||
| WD 2 | 107..146 | 24/38 (63%) | |||
| WD40 repeat | 112..148 | CDD:293791 | 20/35 (57%) | ||
| WD 3 | 149..189 | 24/39 (62%) | |||
| WD40 repeat | 155..190 | CDD:293791 | 20/34 (59%) | ||
| WD 4 | 191..230 | 19/38 (50%) | |||
| WD40 repeat | 196..232 | CDD:293791 | 18/35 (51%) | ||
| WD 5 | 233..272 | 26/38 (68%) | |||
| WD40 repeat | 238..278 | CDD:293791 | 28/39 (72%) | ||
| WD 6 | 283..322 | 27/38 (71%) | |||
| WD40 repeat | 288..312 | CDD:293791 | 16/23 (70%) | ||
| WD 7 | 325..357 | 21/32 (66%) | |||
| WD40 repeat | 330..352 | CDD:293791 | 12/21 (57%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165142994 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0265 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3538 | |
| Inparanoid | 1 | 1.050 | 432 | 1.000 | Inparanoid score | I1719 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54559 | |
| OrthoDB | 1 | 1.010 | - | - | D1133270at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004893 | |
| OrthoInspector | 1 | 1.000 | - | - | oto91592 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102288 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR44006 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R273 |
| SonicParanoid | 1 | 1.000 | - | - | X3449 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 15 | 14.800 | |||||