DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3436 and AT2G43770

DIOPT Version :9

Sequence 1:NP_001285543.1 Gene:CG3436 / 33180 FlyBaseID:FBgn0031229 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_181905.1 Gene:AT2G43770 / 818980 AraportID:AT2G43770 Length:343 Species:Arabidopsis thaliana


Alignment Length:310 Identity:167/310 - (53%)
Similarity:225/310 - (72%) Gaps:0/310 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGA 100
            :|..|||:|:||||.|.||...::|.:|:|.|.|:.|...||:|::|:|:.||:|.|.:.||..|
plant    34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNA 98

  Fly   101 VMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTI 165
            :::.|:|.|||.|.:.|.|||:..||:.||::.::...|.:||||...:|||..|:.|||||.|.
plant    99 ILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163

  Fly   166 KIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGM 230
            |:||.|::.|..|....:|:|||.|.|..:::.:||:||:||:||:||......|.||.||||||
plant   164 KLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGM 228

  Fly   231 SLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSAD 295
            ||||:|.::|||.|||.|.|||:|||||..||||:|:|||||||||||:|:|||...|:|:||:|
plant   229 SLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSD 293

  Fly   296 RHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
            |.|:|||..:||.:||||||.||||...|.|.||:|.|.||||.:|||||
plant   294 RMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3436NP_001285543.1 WD40 <19..346 CDD:225201 167/310 (54%)
WD40 50..342 CDD:238121 153/291 (53%)
WD40 repeat 58..96 CDD:293791 15/37 (41%)
WD40 repeat 102..138 CDD:293791 14/35 (40%)
WD40 repeat 143..180 CDD:293791 19/36 (53%)
WD40 repeat 186..221 CDD:293791 15/34 (44%)
WD40 repeat 227..267 CDD:293791 28/39 (72%)
WD40 repeat 277..313 CDD:293791 20/35 (57%)
WD40 repeat 319..342 CDD:293791 12/22 (55%)
AT2G43770NP_181905.1 WD40 49..340 CDD:238121 153/290 (53%)
WD40 repeat 57..94 CDD:293791 15/36 (42%)
WD40 repeat 99..135 CDD:293791 14/35 (40%)
WD40 repeat 142..177 CDD:293791 17/34 (50%)
WD40 repeat 183..219 CDD:293791 15/35 (43%)
WD40 repeat 227..265 CDD:293791 26/37 (70%)
WD40 repeat 275..299 CDD:293791 13/23 (57%)
WD40 repeat 317..340 CDD:293791 12/22 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3538
Inparanoid 1 1.050 376 1.000 Inparanoid score I550
OMA 1 1.010 - - QHG54559
OrthoDB 1 1.010 - - D1133270at2759
OrthoFinder 1 1.000 - - FOG0004893
OrthoInspector 1 1.000 - - oto4154
orthoMCL 1 0.900 - - OOG6_102288
Panther 1 1.100 - - LDO PTHR44006
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3449
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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