Sequence 1: | NP_001285543.1 | Gene: | CG3436 / 33180 | FlyBaseID: | FBgn0031229 | Length: | 347 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956616.1 | Gene: | snrnp40 / 393292 | ZFINID: | ZDB-GENE-040426-978 | Length: | 347 | Species: | Danio rerio |
Alignment Length: | 345 | Identity: | 192/345 - (55%) |
---|---|---|---|
Similarity: | 256/345 - (74%) | Gaps: | 14/345 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGTKRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHP 65
Fly 66 EGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATG 130
Fly 131 QRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGE 195
Fly 196 QVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGE 260
Fly 261 RCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFS 325
Fly 326 PKEPLILSGSSDKTLYLGEI 345 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3436 | NP_001285543.1 | WD40 | <19..346 | CDD:225201 | 187/327 (57%) |
WD40 | 50..342 | CDD:238121 | 173/291 (59%) | ||
WD40 repeat | 58..96 | CDD:293791 | 18/37 (49%) | ||
WD40 repeat | 102..138 | CDD:293791 | 18/35 (51%) | ||
WD40 repeat | 143..180 | CDD:293791 | 22/36 (61%) | ||
WD40 repeat | 186..221 | CDD:293791 | 16/34 (47%) | ||
WD40 repeat | 227..267 | CDD:293791 | 24/39 (62%) | ||
WD40 repeat | 277..313 | CDD:293791 | 24/35 (69%) | ||
WD40 repeat | 319..342 | CDD:293791 | 15/22 (68%) | ||
snrnp40 | NP_956616.1 | WD40 | <48..347 | CDD:225201 | 180/299 (60%) |
WD40 | 52..343 | CDD:238121 | 173/290 (60%) | ||
WD40 repeat | 59..97 | CDD:293791 | 18/37 (49%) | ||
WD40 repeat | 103..139 | CDD:293791 | 18/35 (51%) | ||
WD40 repeat | 144..181 | CDD:293791 | 22/36 (61%) | ||
WD40 repeat | 187..222 | CDD:293791 | 16/34 (47%) | ||
WD40 repeat | 228..268 | CDD:293791 | 24/39 (62%) | ||
WD40 repeat | 278..314 | CDD:293791 | 24/35 (69%) | ||
WD40 repeat | 320..343 | CDD:293791 | 15/22 (68%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170575844 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0265 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3538 | |
Inparanoid | 1 | 1.050 | 427 | 1.000 | Inparanoid score | I1723 |
OMA | 1 | 1.010 | - | - | QHG54559 | |
OrthoDB | 1 | 1.010 | - | - | D1133270at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004893 | |
OrthoInspector | 1 | 1.000 | - | - | oto38803 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102288 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR44006 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R273 |
SonicParanoid | 1 | 1.000 | - | - | X3449 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.800 |