| Sequence 1: | NP_608501.1 | Gene: | CG3436 / 33180 | FlyBaseID: | FBgn0031229 | Length: | 347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_477160.1 | Gene: | Lis-1 / 36791 | FlyBaseID: | FBgn0015754 | Length: | 411 | Species: | Drosophila melanogaster |
| Alignment Length: | 311 | Identity: | 83/311 - (26%) |
|---|---|---|---|
| Similarity: | 136/311 - (43%) | Gaps: | 54/311 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 LMAYTNRDKAL----LESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQ 83
Fly 84 VYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQG 148
Fly 149 SRRGQQLLCSGSDDRTIKIWDARKKHA-------AHTLE----SPFQVTAVCFGDT--------- 193
Fly 194 --GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPY 256
Fly 257 APGERCVKVFQGHQH-----NFEKNLLRCAWSPGSDKITSGSADRHVYIWD 302 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3436 | NP_608501.1 | WD40 | <46..342 | CDD:441893 | 77/284 (27%) |
| WD40 repeat | 58..96 | CDD:293791 | 10/37 (27%) | ||
| WD40 repeat | 102..138 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 143..180 | CDD:293791 | 11/43 (26%) | ||
| WD40 repeat | 186..221 | CDD:293791 | 9/45 (20%) | ||
| WD40 repeat | 227..267 | CDD:293791 | 13/39 (33%) | ||
| WD40 repeat | 277..313 | CDD:293791 | 6/26 (23%) | ||
| WD40 repeat | 319..342 | CDD:293791 | |||
| Lis-1 | NP_477160.1 | LisH | 9..40 | CDD:128913 | |
| WD40 | 100..409 | CDD:238121 | 82/309 (27%) | ||
| WD40 repeat | 111..148 | CDD:293791 | 7/33 (21%) | ||
| WD40 repeat | 154..191 | CDD:293791 | 10/36 (28%) | ||
| WD40 repeat | 196..232 | CDD:293791 | 11/35 (31%) | ||
| WD40 repeat | 239..274 | CDD:293791 | 8/35 (23%) | ||
| WD40 repeat | 280..336 | CDD:293791 | 11/56 (20%) | ||
| WD40 repeat | 342..378 | CDD:293791 | 13/39 (33%) | ||
| WD40 repeat | 384..408 | CDD:293791 | 7/32 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||