| Sequence 1: | NP_608501.1 | Gene: | CG3436 / 33180 | FlyBaseID: | FBgn0031229 | Length: | 347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_569960.2 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
| Alignment Length: | 311 | Identity: | 67/311 - (21%) |
|---|---|---|---|
| Similarity: | 116/311 - (37%) | Gaps: | 82/311 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 47 PIMQ-LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPD 109
Fly 110 ---GSHIFTCSTDKTLAFWDI-------ATGQRQRRFKGHGNFVNSV---QGSRRGQQLLCSGSD 161
Fly 162 DRTIKIWDARKKHAAHTLE------SPFQVTAVCFGDTG-----------------EQVISGGID 203
Fly 204 NEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEG------DFILTNAMDNTLRVWDVRPYAPGERC 262
Fly 263 VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNT---RRILY 310 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3436 | NP_608501.1 | WD40 | <46..342 | CDD:441893 | 67/311 (22%) |
| WD40 repeat | 58..96 | CDD:293791 | 7/38 (18%) | ||
| WD40 repeat | 102..138 | CDD:293791 | 8/45 (18%) | ||
| WD40 repeat | 143..180 | CDD:293791 | 10/39 (26%) | ||
| WD40 repeat | 186..221 | CDD:293791 | 12/51 (24%) | ||
| WD40 repeat | 227..267 | CDD:293791 | 9/45 (20%) | ||
| WD40 repeat | 277..313 | CDD:293791 | 11/37 (30%) | ||
| WD40 repeat | 319..342 | CDD:293791 | |||
| Rbcn-3B | NP_569960.2 | WD40 repeat | 20..63 | CDD:293791 | |
| WD40 | <22..202 | CDD:475233 | |||
| WD40 repeat | 68..107 | CDD:293791 | |||
| WD40 repeat | 118..152 | CDD:293791 | |||
| WD40 repeat | 160..204 | CDD:293791 | |||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | 12/57 (21%) | ||
| WD40 | 453..>597 | CDD:475233 | 35/152 (23%) | ||
| WD40 repeat | 513..555 | CDD:293791 | 8/47 (17%) | ||
| WD40 repeat | 560..596 | CDD:293791 | 10/35 (29%) | ||
| GvpP | <735..816 | CDD:444004 | |||
| WD40 | <1408..>1469 | CDD:441893 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||