DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3436 and spf38

DIOPT Version :9

Sequence 1:NP_001285543.1 Gene:CG3436 / 33180 FlyBaseID:FBgn0031229 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_596835.1 Gene:spf38 / 2539984 PomBaseID:SPBC1289.11 Length:340 Species:Schizosaccharomyces pombe


Alignment Length:320 Identity:135/320 - (42%)
Similarity:203/320 - (63%) Gaps:3/320 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RDKALLESG--VRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENV 91
            :|.:|:..|  ::|||:|..|.:|:.||..|:..|.|.|.|....|.|.||||.:|.|:.|.:|.
pombe    22 QDSSLITEGSVLQRTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNY 86

  Fly    92 MAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLL 156
            ..::|..||:.:..::.|...::..|:|..|..||..:||:.|:.|||...||::...:.|.:||
pombe    87 GVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELL 151

  Fly   157 CSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLR 221
            .|.|||.|:|:||:|.|....|:|..:.:|||.....|.||..||||..:||||:|.....|.|:
pombe   152 TSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLK 216

  Fly   222 GHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGS 286
            ||.|.||.:::|.:|..:|:|:||||:|::||:|:|..:|.:::|:|..|..|.|||..|||..|
pombe   217 GHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNS 281

  Fly   287 DKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
            ..:.:||:|::||:|.. |..:.|.||||.||||.|||.|.:.:|||.|||:|::|||::
pombe   282 RFVGAGSSDKNVYVWSA-TGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRTIFLGELN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3436NP_001285543.1 WD40 <19..346 CDD:225201 135/318 (42%)
WD40 50..342 CDD:238121 124/291 (43%)
WD40 repeat 58..96 CDD:293791 14/37 (38%)
WD40 repeat 102..138 CDD:293791 9/35 (26%)
WD40 repeat 143..180 CDD:293791 16/36 (44%)
WD40 repeat 186..221 CDD:293791 16/34 (47%)
WD40 repeat 227..267 CDD:293791 16/39 (41%)
WD40 repeat 277..313 CDD:293791 14/35 (40%)
WD40 repeat 319..342 CDD:293791 13/22 (59%)
spf38NP_596835.1 WD40 48..334 CDD:238121 122/286 (43%)
WD40 <55..340 CDD:225201 123/285 (43%)
WD40 repeat 58..91 CDD:293791 13/32 (41%)
WD40 repeat 97..133 CDD:293791 9/35 (26%)
WD40 repeat 138..175 CDD:293791 16/36 (44%)
WD40 repeat 181..216 CDD:293791 16/34 (47%)
WD40 repeat 222..259 CDD:293791 16/36 (44%)
WD40 repeat 272..307 CDD:293791 14/35 (40%)
WD40 repeat 313..334 CDD:293791 12/20 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3538
Inparanoid 1 1.050 282 1.000 Inparanoid score I668
OMA 1 1.010 - - QHG54559
OrthoFinder 1 1.000 - - FOG0004893
OrthoInspector 1 1.000 - - oto102061
orthoMCL 1 0.900 - - OOG6_102288
Panther 1 1.100 - - LDO PTHR44006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R273
SonicParanoid 1 1.000 - - X3449
TreeFam 1 0.960 - -
1312.860

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