| Sequence 1: | NP_001285543.1 | Gene: | CG3436 / 33180 | FlyBaseID: | FBgn0031229 | Length: | 347 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_491325.1 | Gene: | snrp-40.2 / 172015 | WormBaseID: | WBGene00015974 | Length: | 331 | Species: | Caenorhabditis elegans |
| Alignment Length: | 308 | Identity: | 154/308 - (50%) |
|---|---|---|---|
| Similarity: | 212/308 - (68%) | Gaps: | 0/308 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 39 RRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVME 103
Fly 104 AHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Fly 169 DARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLS 233
Fly 234 PEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHV 298
Fly 299 YIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3436 | NP_001285543.1 | WD40 | <19..346 | CDD:225201 | 153/306 (50%) |
| WD40 | 50..342 | CDD:238121 | 143/291 (49%) | ||
| WD40 repeat | 58..96 | CDD:293791 | 15/37 (41%) | ||
| WD40 repeat | 102..138 | CDD:293791 | 16/35 (46%) | ||
| WD40 repeat | 143..180 | CDD:293791 | 19/36 (53%) | ||
| WD40 repeat | 186..221 | CDD:293791 | 16/34 (47%) | ||
| WD40 repeat | 227..267 | CDD:293791 | 18/39 (46%) | ||
| WD40 repeat | 277..313 | CDD:293791 | 19/35 (54%) | ||
| WD40 repeat | 319..342 | CDD:293791 | 9/22 (41%) | ||
| snrp-40.2 | NP_491325.1 | WD40 | 31..321 | CDD:238121 | 142/289 (49%) |
| WD40 repeat | 40..77 | CDD:293791 | 14/36 (39%) | ||
| WD40 repeat | 82..118 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 125..161 | CDD:293791 | 18/35 (51%) | ||
| WD40 repeat | 166..202 | CDD:293791 | 16/35 (46%) | ||
| WD40 repeat | 208..248 | CDD:293791 | 18/39 (46%) | ||
| WD40 repeat | 258..282 | CDD:293791 | 15/23 (65%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160157454 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0265 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3538 | |
| Inparanoid | 1 | 1.050 | 368 | 1.000 | Inparanoid score | I1242 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54559 | |
| OrthoDB | 1 | 1.010 | - | - | D1133270at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004893 | |
| OrthoInspector | 1 | 1.000 | - | - | otm14262 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102288 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR44006 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R273 |
| SonicParanoid | 1 | 1.000 | - | - | X3449 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 15 | 14.840 | |||||