DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pus10 and Y48C3A.20

DIOPT Version :10

Sequence 1:NP_608500.1 Gene:Pus10 / 33178 FlyBaseID:FBgn0031227 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001364616.1 Gene:Y48C3A.20 / 174977 WormBaseID:WBGene00012998 Length:469 Species:Caenorhabditis elegans


Alignment Length:535 Identity:147/535 - (27%)
Similarity:228/535 - (42%) Gaps:133/535 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VCEICQLRYLKARGAEYRNINETLQKLDVKLNENVENEELVISEGSQPSKRARLGVCSTCLGLFS 79
            :||:|           .|.|:.             :.||:...|.|..        |..|.|:..
 Worm    10 LCEVC-----------VRQISG-------------DAEEVTKCENSFE--------CQLCFGIMD 42

  Fly    80 KDFQNELLSSILASDFAK--YDCQKIVLAICLPMSLQLRQLAMWFALRRRFGPSIDENNPPDVPI 142
            :...:|:...: ..:.:|  ||....:||:.||:...||::.: ..||..|..::     ..||.
 Worm    43 QAMIDEVGEKV-QEELSKLPYDSMSFILALNLPVGQTLREILV-SRLRPDFNGTL-----ASVPY 100

  Fly   143 KEAVKLILHPIICEKLAKVYDANG----LMINIDLTHSLEGEE------------------VEKL 185
            |..       .|...|.|:...:|    |..::.|..:.|.||                  |.|.
 Worm   101 KVR-------NIDGYLKKLGSYSGKRPTLSSDLQLMITFEQEESNFSDLQFLQNQFPNDFRVGKR 158

  Fly   186 VKL--NKEAFPAKASHQKRIEISRGLLEKQYQPSKVKAETYEKYFQIPCSNVEESIKLTSIDLQG 248
            .:.  |:|| |:..|.|:..:::..:.|:..:....|:.|.:..||              :..:.
 Worm   159 GRYNNNQEA-PSSVSKQQLQQVTGRINEQIAKKYIFKSPTRKCTFQ--------------LQFER 208

  Fly   249 PLICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIIIRHVGPHFTEKLGKI----------TFM 303
            ..:.:||||.|.||.|..:||          |.::...|..|...:||:..:          .|:
 Worm   209 DPVYIAGRYCKYSRCLPQSPW----------SEDKDAPREPGNSVSEKVCDLLKKQFGASDSRFV 263

  Fly   304 SSGREDVDVRCLGKGRPFVLEIPNAKRSCLTKDEAF-----AMERAVDASGMVSIHHLQVVPREE 363
            :|||||:|||.||.|||||:|:.|.:.:...:...:     .::.|::....|.:..|..|||:.
 Worm   264 TSGREDIDVRMLGTGRPFVVELRNCRTTAPVRGIKYLETLKTVQEAINVQKDVKVVSLTRVPRDV 328

  Fly   364 LTHIKTGEEQKKKFYRALCALQEPVSVKILEQLQISASFNIQQKTPIRVLHRRPLHTRPRTIYSV 428
            ...:..|||.|:|.|.|.|....|:|.......|......|.||||:||:.||.|..|.|.|||:
 Worm   329 SEKLCVGEEDKRKQYCAYCYSILPISDSQFTAAQSKIPLKIVQKTPVRVMKRRALLDRERWIYSM 393

  Fly   429 TAKVHRGNPKALIID-------IVTQAGTYIKELVHGEFGRTTPSLSSII----GKPMDIQALDV 482
                     ..|.:|       :.|||||||||.|||:||||.|||:.::    |: :||..|||
 Worm   394 ---------NFLKLDDHHFEVRLETQAGTYIKEFVHGDFGRTRPSLAELLDVEHGE-VDILELDV 448

  Fly   483 VGIDLDWPHEVDNSK 497
            ..:||:||.|:.:.:
 Worm   449 EKVDLEWPPELKDGQ 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus10NP_608500.1 Pus10 <243..486 CDD:440870 92/268 (34%)
Y48C3A.20NP_001364616.1 Pus10 <182..458 CDD:440870 101/309 (33%)

Return to query results.
Submit another query.