DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42399 and Togaram1

DIOPT Version :9

Sequence 1:NP_608498.3 Gene:CG42399 / 33176 FlyBaseID:FBgn0259818 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_234236.4 Gene:Togaram1 / 314169 RGDID:1310474 Length:1826 Species:Rattus norvegicus


Alignment Length:1275 Identity:293/1275 - (22%)
Similarity:481/1275 - (37%) Gaps:393/1275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   665 DWRNRLMGIGQLELAL-----SSSSNLALVQPYLDSLLRTLLSSERHFEVSDLKRELLVNLISRL 724
            |::||...:.:|:..|     ||:.:.:||.  ..|||..|| .:.:|:|.....::|..|:.||
  Rat   363 DYKNRTQAVEELKQLLGKFNPSSTPHSSLVG--FISLLYNLL-DDSNFKVVHGTLQVLHLLVIRL 424

  Fly   725 ---------PL---------DN---LEERTPQILSGLCRQGNAGANRVCKALMQRLPAGTIVAKL 768
                     |:         ||   :::...:|...|.::  .|..:|...|::.|.        
  Rat   425 GEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKE--VGPQQVLSLLLENLK-------- 479

  Fly   769 TSPEFLHAKSSKFRDHALQMSIFALMTFPGTCFDISLLTTQAVYSLLNRKRRVRQAALEVLAVLA 833
                  | |.|:.|:..:.:.|.:|:|:|...||::.|:.....:|::.||||||||||..||||
  Rat   480 ------H-KHSRVREEVVNICICSLLTYPSEDFDLTKLSFDLAPALVDSKRRVRQAALEAFAVLA 537

  Fly   834 DISSIKEVLT-IVSETTDGVEL---GPMVLEATSVRLSRLQLPIVTPDSGVLFVFNQTDPPGAR- 893
              ||:....| ::.:..|.|||   |..|:.|...||:|..||.:|....|.:..........| 
  Rat   538 --SSMGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPSSAQGRS 600

  Fly   894 ---RFGADVDWIHQGE--------------------GSASPNTIKRRRMRAASSQRN-------- 927
               ..|||.||:..|.                    ||.|| ||..||:.:|...:|        
  Rat   601 SHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSP-TICTRRVLSAGKGKNKLPWENEQ 664

  Fly   928 --VLGGAEAKNKNDPFPSFRQVNESVHRHSFH----SPPETLDMASPIND---FSQRLSFGAKTN 983
              |:|..:..|..|        .:...:.|.|    ||........|:||   ||::.|      
  Rat   665 PGVMGENQTSNSKD--------IKDTEQFSAHDLIPSPKLKPSQGMPVNDDLCFSKKRS------ 715

  Fly   984 GGSQSFIERRFLAKACSDTSMDGRSTDSTTTTCSSGSATD------------SFIQLTSRTGGRL 1036
                    .|.|.::..|.:.|      :..||.:|:...            ...|:..:||.  
  Rat   716 --------SRNLFQSSRDFNSD------SIPTCGAGNTATLQTNLPGKCGQLGLSQIGCKTGS-- 764

  Fly  1037 AGPNSRF-PTMNQHADFVNNFMRSMQRGSKSHSV-----ER----------------PNYP---- 1075
            .|.:.:| .|.|.|.|.|   ..|:..||||...     ||                |:||    
  Rat   765 VGSDLQFLGTANGHQDKV---CASLNFGSKSQQTFGSQSERTSSYSGSNASPGPFILPSYPLSSP 826

  Fly  1076 --------KVSYSIPKSQQMIRKKFQHK---DSFTKLGDEPPGQSIENNK--------FNE---- 1117
                    .:|.| ||..|.....|.:.   .||..|....|.:.:.|.|        |.|    
  Rat   827 RTSPKHASPLSVS-PKKSQDNSTSFSNSWPLKSFEGLSKPSPQKKLANQKSSNPTGENFQEKTTP 890

  Fly  1118 -----------SQRR--------------------KSGIST------------------------ 1127
                       |.||                    |:.:||                        
  Rat   891 VQLIPSLVRSPSSRRGLNGTKPVPPIPRGISLLPDKADLSTVGHIKKQPDDIWKSEKDNLTIDLS 955

  Fly  1128 -----------DHMESL-----------------DSKCADVIKSVDTETEVNGMTNGSPISASS- 1163
                       :.|:|.                 .|..:|| .|.|:..::. :|..||..:|| 
  Rat   956 ELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDV-DSPDSAMKLE-LTIDSPSRSSSP 1018

  Fly  1164 --TSYSQK---STASAKSSISQNEMGKRPFS-----------STGLWNDCKVEVLNREHNP---- 1208
              :|||:.   |..|..||:|....|||..|           ||.|.:..|:.....:.:.    
  Rat  1019 NISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISPAAEQSSSAGIT 1083

  Fly  1209 -----------NEAFG----------ELVVDAIKVQTESEPTAHEELLKLNGSLNSLHSKTESIK 1252
                       |..||          :::..|:|:|.:..| .|:            |:|..:..
  Rat  1084 TSSVSIIGQRMNYGFGCGDFEEDRSHDILPSALKIQNKEHP-RHK------------HTKGFTRS 1135

  Fly  1253 TQLEETTPQLSRAQSVKSLLIEEDIESSNSFVVV-EEVENELESSPAKGEEEVPLQEELATPVKA 1316
            :.|:    |:|......:..:.||     |.|:| :.|.....|:|....:.|           .
  Rat  1136 SNLQ----QISSFDFTATNTLSED-----SVVIVGKGVFGNPNSAPTTCNQPV-----------I 1180

  Fly  1317 TKLENH-TFG--PKLVPTHDEIVIHSRSVSLDS-LYGTRPASKQGSMDTSTSTAENT-------S 1370
            :.:||. ||.  |.:.|...   |:.|:|..:: ||    ...:...||..|.|::|       .
  Rat  1181 SSVENEDTFSVKPSIEPPSG---IYGRAVQQNTPLY----LDVENDKDTKVSIAKSTYDKMRQKR 1238

  Fly  1371 QTGSQIGNTSVPAKAQHTP---LKH---KSKTS-----------YFLRAQRRISPSKQPIKMSQA 1418
            :...::.:.....:.:.:|   :||   :..||           |   .:|..|.:..|..|...
  Rat  1239 KEEKELFDAKDCERKETSPWERIKHPGTEKMTSENEPSPGVIPQY---KERMSSVTHSPEIMDSL 1300

  Fly  1419 ELFPQNMVRFDRPREALLKTFDQLDSSNWEVNVSGLKSMVRLIRYHAETLDNQMHMTCIQLTRSV 1483
            ||.|     |.:|..||.:....|...:||..:.||..:..|..:|::.|:.::|.|...:.:.|
  Rat  1301 ELRP-----FSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETTFAVVQEV 1360

  Fly  1484 RNLRSQVARASCQAAAELFSLKSTSLQQECDDLVCALLHRTADTNRFLRADANRALESMVDHAQP 1548
            :||||.|:||:.....:||:....|:.||.|..|.||||:..::|.|:|.|.::||::||::..|
  Rat  1361 KNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALKAMVNNVTP 1425

  Fly  1549 QKILNILATKGAQHQNALVRTTSAKLLFRLVERLGSDRIYAMGRESRDKFFVVGANLLLEGSLET 1613
            .:.:..|...|..|.:..||..:|:.|..:||.:..:||.:..::..::.....|....:.|.||
  Rat  1426 ARAVISLINGGQSHLHIAVRRCTAQHLADVVECMEPERISSGAKDMAERLLPAAAKFAQDSSQET 1490

  Fly  1614 RSYAKSLFRALSENHNYQRLLLEVIPPRTYRNVEKTLRSI 1653
            |.|.:.:...:..:.|:::||.:.||.:....::::::::
  Rat  1491 RYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNL 1530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42399NP_608498.3 CLASP_N 1433..1627 CDD:289144 57/193 (30%)
Togaram1XP_234236.4 HEAT repeat 181..203 CDD:293787
HEAT repeat 214..241 CDD:293787
HEAT repeat 251..285 CDD:293787
HEAT repeat 395..419 CDD:293787 8/24 (33%)
HEAT repeat 431..463 CDD:293787 5/31 (16%)
HEAT repeat 470..497 CDD:293787 8/41 (20%)
HEAT repeat 506..535 CDD:293787 13/28 (46%)
HEAT repeat 545..570 CDD:293787 8/24 (33%)
Spc7_N <789..905 CDD:292045 24/116 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2933
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3722
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004509
OrthoInspector 1 1.000 - - otm45954
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.860

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