DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42399 and Togaram2

DIOPT Version :9

Sequence 1:NP_608498.3 Gene:CG42399 / 33176 FlyBaseID:FBgn0259818 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_017449897.2 Gene:Togaram2 / 313892 RGDID:1310677 Length:1184 Species:Rattus norvegicus


Alignment Length:642 Identity:148/642 - (23%)
Similarity:253/642 - (39%) Gaps:116/642 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1058 RSMQRG---SKSHSVERPNYPK---VSYSIPK--SQQMIRKKFQHKDSFTKLGDEPPGQSI---- 1110
            |.:..|   |...|::....||   :..:||:  ||:::|..          ...||.|||    
  Rat   292 RRLSEGMAASSQVSLDPVGGPKGVPLRSTIPRTASQRLLRVP----------RPMPPIQSIPTTP 346

  Fly  1111 ENNKFNESQRRKSG-----------ISTDHMESLDSKCADVIKSVDTETEVNGMTNGSPISASST 1164
            |.|...|......|           ||..::...|.|....:..:        :....|.:...|
  Rat   347 EANSAKEKDLDPPGGRPGAGAQEVQISRQYLHCADEKMHKSLGGI--------VIPPIPKARMPT 403

  Fly  1165 SYSQKSTASAKSSISQNE---MGKR--PFSSTGLWNDCKVEVLNREHNPNEAFGELVVDAIKVQT 1224
            ..|.....|..|.:...:   ||.|  |...|     |:...|  |..|.....:.:|.|:|.::
  Rat   404 GTSSCRPGSRSSPLCPGQDGLMGTRAPPTRLT-----CENGPL--EKTPKSLAPKPLVPAVKAKS 461

  Fly  1225 -ESEPTAHEELLKLNGSLNSLHSKTESIKTQLEETTPQLSRAQSVKSLLIEEDIESSNSFVVVEE 1288
             |:.||             ||.|...:.     ..|...|.|:..:||..|||...|::.|.|..
  Rat   462 AEAPPT-------------SLASSQSTF-----TLTAFSSHAKETRSLTNEEDQRESSTKVQVTI 508

  Fly  1289 VENELESSPAKGEEEVPLQEELATPVKATKLENHTFGPKLVPTHDEIVIHSRSVSLDSLYGTRPA 1353
            .::..|....|..:|:.|......|.:..:|.:...|.                       .|.:
  Rat   509 SKSAQEKMRLKQLKEMELLRRAKEPERERELASQGLGT-----------------------WRTS 550

  Fly  1354 SKQGSMDT--STSTAENTSQTGSQIGN--------------TSVPAKAQHTPL-KHKSKTSYFLR 1401
            :|:|.:..  |.:.:|.|..:..:..|              .::|...|.... :|.|..|  |.
  Rat   551 AKEGLLPLRGSGTLSEPTGMSSPRRNNIGVLQRKRANRASLPNIPVSKQEPGFARHASANS--LP 613

  Fly  1402 AQRRI-SPSKQPIKMSQAELFPQNMVR-FDRPREALLKTFDQLDSSNWEVNVSGLKSMVRLIRYH 1464
            |...: ||..:..:..:.:|......| |..|...|.:....|.|::|::...||.::.||...|
  Rat   614 AMLTLGSPEWEEEEEEEMDLQALREFRPFSNPELGLTEALQCLSSNDWQMKEKGLVNIQRLAACH 678

  Fly  1465 AETLDNQMHMTCIQLTRSVRNLRSQVARASCQAAAELFSLKSTSLQQECDDLVCALLHRTADTNR 1529
            :|.|..::|...:.:|..|.||||:|:|.:.....:||.....|:.||.:::|..||.:..:|:.
  Rat   679 SEVLGTRLHDVSLAVTAEVTNLRSKVSRLAISTLGDLFRALKKSMDQEAEEIVRCLLQKMGNTSE 743

  Fly  1530 FLRADANRALESMVDHAQPQKILNILATKGAQHQNALVRTTSAKLLFRLVERLGSDRIYAMGRES 1594
            |::..|||||.:||::..|.:.|..|.:.|..|:|.|||..:||.|..::|::|::::.:..|::
  Rat   744 FIQRAANRALGAMVENVTPARALVALTSAGVYHRNPLVRKCTAKHLSAVLEQIGAEKLLSGSRDN 808

  Fly  1595 RDKFFVVGANLLLEGSLETRSYAKSLFRALSENHNYQRLLLEVIPPRTYRNVEKTLR 1651
            .|........|..:.:.:||.|.:.:...|..|..:...|.:.:|....|.|...::
  Rat   809 TDMLVHNLVRLAQDSNQDTRFYGRKMVNILMANAKFDAFLKQSLPSHDLRKVMAAIK 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42399NP_608498.3 CLASP_N 1433..1627 CDD:289144 58/193 (30%)
Togaram2XP_017449897.2 PLN03209 <196..475 CDD:178748 47/220 (21%)
CLASP_N 660..828 CDD:403532 51/167 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6940
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004509
OrthoInspector 1 1.000 - - otm45954
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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