DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42399 and che-12

DIOPT Version :9

Sequence 1:NP_608498.3 Gene:CG42399 / 33176 FlyBaseID:FBgn0259818 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001256204.1 Gene:che-12 / 179433 WormBaseID:WBGene00000491 Length:1282 Species:Caenorhabditis elegans


Alignment Length:1138 Identity:216/1138 - (18%)
Similarity:375/1138 - (32%) Gaps:428/1138 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 NISPKVPHKQIEVLHNLQRDPSPRSQRRSEDMDGNGDGKALHATGNPSSSPTQPLISRTRSASTM 636
            |:||:......::..|:|.:       .:|...|:|   .|.|:..|.|...:    |.|.....
 Worm   218 NLSPEKREVLEQITANVQVE-------HTESKAGSG---VLRASAKPQSGGER----RLRFGIVP 268

  Fly   637 SPVSPATPKSWEDLDIVNLKTLLELRSGDWRNRLMGIGQLELALS--SSSNLALVQPYLDSLLRT 699
            |.|.....   ||.|.              ..|:.|:.:::..:.  :...:|.:.|:|.|.| .
 Worm   269 SLVCALIA---EDTDA--------------NQRISGLEKMKQVVDQITPEEIARLVPHLHSYL-L 315

  Fly   700 LLSSERHFEVSDLKRELLVNLISRLPLD-----------NLEERTPQILSGLCRQ-GNAGANRVC 752
            :||:    .:.||..:::|     |.||           ::|....|.::.:.:. ||  ...|.
 Worm   316 MLSN----VLEDLNFKVVV-----LALDIVRATGHHLKGHMEAHIQQFVNLVAKHFGN--QKSVI 369

  Fly   753 K--------ALMQRLPAGTIVAKLTSPEFLHAKSSKFRDHALQMSIFALMTFPGTCFDISLLTTQ 809
            |        .|.|.:...|:...|.  .||..|:|:.|:..:.:...:|||...:.|::..|...
 Worm   370 KQIIMMTFMELFQNINPKTVGGCLR--VFLENKNSRVREEVINIYTASLMTISPSKFNLQPLVNI 432

  Fly   810 AVYSLLNRKRRVRQAALEVLAVLADISSIK-EVLTIVSETTDGVELGPMVLEATSVRLSRLQLPI 873
            .|....:.|:|||.||.|.|:|||.:.:.| |::.......:..:....:.||.:.|:.|..||.
 Worm   433 LVPMFHDVKKRVRLAAFEQLSVLAYLLNGKTEIIMKPVRDFEQDQNSRGLTEAVTARIRRQVLPR 497

  Fly   874 VTPDSGVLFVFNQTDPPGARRF-----------GADVDWIHQGEGSASPNTIKRRRMRAASSQRN 927
            :..|.    :...:.||....|           .||:.||...                      
 Worm   498 IRYDG----LIEYSTPPMMDSFDLAEAEMSLPSNADLSWIVSN---------------------- 536

  Fly   928 VLGGAEAKNKNDPFPSFRQVNESVHRHSFHSPPETLDMASPINDFSQRLSFGAKTNGGSQSFIER 992
              ||.|.    |||                  ..|:   |||:                      
 Worm   537 --GGVEP----DPF------------------ERTM---SPIS---------------------- 552

  Fly   993 RFLAKACSDTSMDGRSTDSTTTTCSSGSATDSFIQLTSRTGGRLAGPNSRFPTMNQHADFVNNFM 1057
                                                       |||   ...|:.::        
 Worm   553 -------------------------------------------LAG---NLATIRRN-------- 563

  Fly  1058 RSMQRGSKSHSVERPNYPKVSYSIPKSQQMIRKKFQHKDSFTKLGDEPPGQSIENNKFNESQRRK 1122
            |.:|:..::   |:|     |:|:|                     :.|.|...    :::||..
 Worm   564 RVIQQQGQA---EKP-----SFSLP---------------------QQPAQQAS----HQAQRLP 595

  Fly  1123 SGISTDHMESLDSKCADV--------IKSVDTETEVNGMTNGSPISASSTSYSQKS---TASAKS 1176
            :||...| |:.::...|:        :||.|:.....|....:|.|::|:..:.|.   :.|.||
 Worm   596 NGIEKSH-ETSENSSLDIGQRIVMTRMKSDDSFVRRQGSAASNPNSSTSSWEAPKRPPISPSEKS 659

  Fly  1177 SISQNEMGKRPFSSTGLWNDCKVEVLNREHNPNEAFGELVVDAIKVQTESEPTAHEELLKLNGSL 1241
            |||..                |.|| |..|                           ::| .|:|
 Worm   660 SISAT----------------KKEV-NNNH---------------------------IVK-KGNL 679

  Fly  1242 NSLHSKTESIKTQLEETTPQLSRAQSVKSLLIEEDIESSNSFVVVEEVENE----LESSPAKGEE 1302
            .|:.::::   |.|.|...:                         ||:||:    .:..|||...
 Worm   680 KSMRARSD---TNLSEDHGE-------------------------EEMENDPPRSFDDRPAKASG 716

  Fly  1303 EVPLQEELATPVKATKLENHTFGPKLVPTHDEIVIHSRSVSLDSLYGTRPASKQGSMDTSTSTAE 1367
            :...|:               |...:||                                     
 Worm   717 QYSFQD---------------FDAAIVP------------------------------------- 729

  Fly  1368 NTSQTGSQIGNTSVPAKAQHTPLKHKSKTSYFLRAQRRISPSKQPIKMSQAELFPQNMVRFDRPR 1432
             :|.....|.:.|:|. ..|.||||.     ..:.|:||:.:...::..|.:. .:::.:..|..
 Worm   730 -SSMGKKSISHHSLPI-TSHPPLKHA-----ISQPQKRINNNGTFLRSGQGQR-TKSVSKPHREL 786

  Fly  1433 EALLKTFDQLDSSNWEVN--------------VSGLKSMVRLIRYHAETLDNQMHMTCIQLTRSV 1483
            .|:.||:..||:||..||              |.||..:..|.......:.:.:....|.:....
 Worm   787 TAVSKTYSLLDTSNMSVNQALKKMSSDEWADKVDGLNMISTLSETQPRMVADNLKEVIIAILNEC 851

  Fly  1484 RNLRSQVARASCQAAAELFSLKSTSLQQECDDLVCALLHRTAD-TNRFLRADANRALESMVDHAQ 1547
            :||||.|:|.:......:....::.:..|.:.:...||.::.| :|.|:|.||..:|..:|..|.
 Worm   852 KNLRSSVSRVAIVTIGTVAQNLNSKIDSEMEKICAVLLSKSGDVSNAFIRDDATDSLNKLVKAAT 916

  Fly  1548 PQKILNILATKGAQHQNALVRTTSAKLLFRLVERLGSDRIY-----------AMGRESRDKFFVV 1601
            ..|.|..:...||:.:|..:|::.|..::.::...||..|.           .:.:.|||:    
 Worm   917 AGKALQGIILAGAKSKNNTIRSSCANFVYDIITIQGSSAILNNQNALSNVLPVLLQFSRDQ---- 977

  Fly  1602 GANLLLEGSLETRSYAKSLFRALSENHNYQRLL 1634
                    |.:.|:..|.....||::.|:.||:
 Worm   978 --------SPQVRNPGKQSLCFLSKDPNFDRLM 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42399NP_608498.3 CLASP_N 1433..1627 CDD:289144 50/219 (23%)
che-12NP_001256204.1 CLASP_N <840..982 CDD:289144 33/153 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I8071
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004509
OrthoInspector 1 1.000 - - oto20496
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3085
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.030

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