Protein Alignment CG11454 and SGN1

DIOPT Version :10

• Sequence 1: NP_608497.1
• Gene: CG11454 / 33175
• FlyBaseID: FBgn0031224
• Length: 238
• Species: Drosophila melanogaster
• Sequence 2: NP_012266.1
• Gene: SGN1 / 854817
• SGDID: S000001440
• Length: 250
• Species: Saccharomyces cerevisiae
• Alignment Length: 214
• Identity: 49/214 - (22%)
• Similarity: 93/214 - (43%)
• Gaps: 42/214 - (19%)

  Fly    51 DQLVGQL--------------EDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRI 101
            |:|||:|              |:....:.:.:.|::|.||:...||.|.:.:.|...|.|:.:.:
Yeast    31 DELVGKLSIEGTPQVSQKLSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITL 95

  Fly   102 PTD-NNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQLPAYNQS-RLRNQFMM 164
            ..| |.|.|:.:|::.::.......||.| .|.||..||:.:.:: ...:|.:|:. ..:||:..
Yeast    96 LYDRNTGTPKGYGYIEFESPAYREKALQL-NGGELKGKKIAVSRK-RTNIPGFNRHYNSQNQYFQ 158

  Fly   165 E--------ALPQPSPLRHARHSLHNGKPYDRNP-----FGHNADQRRRSDSSVMERNRLKPQQH 216
            :        |.|.|....:.       .||..|.     ||:|.:...||..:  .:||...::|
Yeast   159 QWQWNYPLMAYPNPDTFPYY-------PPYPPNQSPNQNFGYNKNNYYRSPYN--NKNRTFQKKH 214

  Fly   217 HQHMQGGSRRSDQRSNNKR 235
            ....:..::  :.||.:::
Yeast   215 FNSAKDSTK--NIRSTSQK 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11454	NP_608497.1	RRM_RBM7_like	69..143	CDD:409773	23/74 (31%)
SGN1	NP_012266.1	PABP-1234	<52..>202	CDD:130689	38/158 (24%)
		RRM_II_PABPs	65..137	CDD:409747	22/72 (31%)