DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and AT4G10110

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_192749.2 Gene:AT4G10110 / 826602 AraportID:AT4G10110 Length:173 Species:Arabidopsis thaliana


Alignment Length:177 Identity:46/177 - (25%)
Similarity:77/177 - (43%) Gaps:42/177 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 TLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTD-NNGRPRNFGFVTYQRLCAVPFALDLYQGL- 133
            |::.||:||||::.:||::.:|||.:..:.||.| ...:|:.|.|..|:......:|:.|:.|| 
plant     8 TVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEIADYAVKLFSGLV 72

  Fly   134 ELFQK--KVTIKQQGGKQLPAYNQS-RLRNQ-----------------FMMEALPQPSPLRHARH 178
            .|:.:  |..|..|...|..:.|.. |.|.|                 |..:.:..||||     
plant    73 SLYNRTLKFAISGQDKLQSNSANSGHRARPQSLAFEHSDRAAYHHLERFSSQLISPPSPL----- 132

  Fly   179 SLHNGKP--YDRNP------FGHNADQRRRSDSSVMER-NRLKPQQH 216
                  |  |.:.|      .|.:.:..||...|.::. |..:|:::
plant   133 ------PLDYTQEPPPPGVSNGASLEYSRRVLGSALDSINHSRPRRY 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 25/75 (33%)
AT4G10110NP_192749.2 RRM1_SF3B4 9..83 CDD:409771 24/73 (33%)

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