DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and AT2G16940

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001189538.1 Gene:AT2G16940 / 816197 AraportID:AT2G16940 Length:610 Species:Arabidopsis thaliana


Alignment Length:111 Identity:35/111 - (31%)
Similarity:55/111 - (49%) Gaps:4/111 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GQHQEQPIYPFLPNENGDQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEG 98
            |..:...:|.:....:.|:...::|.:.|.|.|  |||:|...:..|.||..:||.|.:||.:..
plant   197 GTSRASCVYAYWRKRHKDKKEDKVEPEADPERD--QRTVFAYQIALRATERDVYEFFSRAGKVRD 259

  Fly    99 VRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIK 143
            |||..|. :.|.|..|:|.:....:||.|:.| .|..|..:.|.:|
plant   260 VRIIMDRISRRSRGIGYVEFYDTMSVPMAIAL-SGQPLLGQPVMVK 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 27/74 (36%)
AT2G16940NP_001189538.1 SF-CC1 30..607 CDD:273721 35/111 (32%)

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