DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and Myef2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001013223.2 Gene:Myef2 / 679712 RGDID:1306547 Length:591 Species:Rattus norvegicus


Alignment Length:81 Identity:26/81 - (32%)
Similarity:43/81 - (53%) Gaps:1/81 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 TLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLEL 135
            |:|..|||.:|..:.|.|||..||.::...|..|.:|:.|..|.||:::......|:.::.|..|
  Rat   225 TIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFL 289

  Fly   136 FQKKVTIKQQGGKQLP 151
            |.:.:.:|.. .|.:|
  Rat   290 FDRPMHVKMD-DKSVP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 23/71 (32%)
Myef2NP_001013223.2 RRM1_MYEF2 92..167 CDD:410059
PABP-1234 115..>587 CDD:130689 26/81 (32%)
RRM2_MYEF2 224..299 CDD:410061 24/73 (33%)
RRM3_MYEF2 515..591 CDD:410063
Blue background indicates that the domain is not in the aligned region.

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