DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and myef2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001025455.2 Gene:myef2 / 641483 ZFINID:ZDB-GENE-051120-114 Length:553 Species:Danio rerio


Alignment Length:144 Identity:40/144 - (27%)
Similarity:62/144 - (43%) Gaps:24/144 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QMYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENGDQL-VGQLEDDDDEEEDEEQRTL 72
            :||.|......|..||.      ||..:.     |.:|:|....| .|:|           ..|:
Zfish   172 RMYGGGRGQDSSGINIP------PSIANN-----PNIPHEIISALQAGRL-----------GATI 214

  Fly    73 FCGNLDERVTEEILYEVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQ 137
            |..|||.:|..:.|.|||..||.:....:..|.:|:.|..|.||:::......|:.::.|..||.
Zfish   215 FVANLDFKVGWKKLKEVFGMAGTVRRADVKEDKDGKSRGMGTVTFEQPLEAVQAISMFNGQMLFD 279

  Fly   138 KKVTIKQQGGKQLP 151
            :::.:|.. .|.||
Zfish   280 RQMHVKMD-DKSLP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 22/73 (30%)
myef2NP_001025455.2 RRM1_MYEF2 82..157 CDD:410059
RRM2_MYEF2 212..287 CDD:410061 23/74 (31%)
RRM3_MYEF2 477..553 CDD:410063
Blue background indicates that the domain is not in the aligned region.

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