DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and rbm39b

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001014392.1 Gene:rbm39b / 541556 ZFINID:ZDB-GENE-050327-97 Length:539 Species:Danio rerio


Alignment Length:65 Identity:21/65 - (32%)
Similarity:37/65 - (56%) Gaps:1/65 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLYQGLEL 135
            |:.|:|...:||::|..:|...|.|||:::..|: .||.:.:||:::........||:...|.||
Zfish   266 LYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFEL 330

  Fly   136  135
            Zfish   331  330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 21/65 (32%)
rbm39bNP_001014392.1 SF-CC1 76..526 CDD:273721 21/65 (32%)

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