DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and tia1

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:XP_012814227.2 Gene:tia1 / 394890 XenbaseID:XB-GENE-1002876 Length:389 Species:Xenopus tropicalis


Alignment Length:86 Identity:24/86 - (27%)
Similarity:38/86 - (44%) Gaps:17/86 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPF---- 125
            |::..|||:.|||...|||.::.:||.|.||.:..::..|..|.         ...|.|.|    
 Frog     2 EEDLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN---------DPYCFVEFFEHR 57

  Fly   126 ----ALDLYQGLELFQKKVTI 142
                :|....|.::..|:|.:
 Frog    58 HAAASLAAMNGRKIMGKEVKV 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 23/82 (28%)
tia1XP_012814227.2 RRM1_TIA1 8..81 CDD:410027 22/80 (28%)
RRM2_TIA1 104..181 CDD:410030
RRM3_TIAR 214..286 CDD:241064
Blue background indicates that the domain is not in the aligned region.

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