DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11454 and Rbmx2

DIOPT Version :10

Sequence 1:NP_608497.1 Gene:CG11454 / 33175 FlyBaseID:FBgn0031224 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001107258.2 Gene:Rbmx2 / 367930 RGDID:1562693 Length:328 Species:Rattus norvegicus


Alignment Length:293 Identity:55/293 - (18%)
Similarity:94/293 - (32%) Gaps:111/293 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NENGDQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVRIPTD-NNGRPR 110
            ||...|| |..|......|.::...:|.|.|...:||..:..||.|.|.|..:.:..| ..|:.:
  Rat    14 NEREVQL-GVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSK 77

  Fly   111 NFGFVTYQRLCAVPFALDLYQGL-----------------------------ELFQK-------- 138
            .|.|:.|:...:...|:|.:.|:                             ||.:|        
  Rat    78 GFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQESEDVDDVTRELQEKGCGAKTPP 142

  Fly   139 ------------KVTIKQQGGK------------------QLPAYNQSRLRNQFMMEALPQPSPL 173
                        |||.|.:..|                  :||:.::|:     .::...:.|..
  Rat   143 SSPPEVSEDEDAKVTKKPKKDKKEKKKKKEKEKTERPVQAELPSCSRSK-----TVKETDEQSAK 202

  Fly   174 RHA--------------RHSLHNGKP------------------YDRNPFGHNADQRRRSDSSVM 206
            :|:              |...|:|.|                  .:::...|....||..:....
  Rat   203 KHSSKPSERAQKSECRERKKSHSGSPDGRTSCRGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSR 267

  Fly   207 ERNR-----LKPQQHHQHMQGGSRRSDQRSNNK 234
            :::|     ....:||.|.:|.|.||..||.::
  Rat   268 DKDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11454NP_608497.1 RRM_RBM7_like 69..143 CDD:409773 24/123 (20%)
Rbmx2NP_001107258.2 RRM_ist3_like 27..115 CDD:409845 19/87 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..328 30/188 (16%)

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